RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 PTBP2Q9UKA9 531 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 MED23Q9ULK4 1368 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ATP6V1G2-DDX39BF2Z307 99 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 TRIM24O15164 1050 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 TM9SF1O15321 606 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 UFL1O94874 794 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ATP6V1G2O95670 118 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 TALDO1P37837 337 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 CLK1P49759 484 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 ITGA1P56199 1179 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ACAP1Q15027 740 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 KYAT1Q16773 422 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 RTFDC1Q9BY42 306 aaPredicted RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 UBE2OQ9C0C9 1292 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 TMOD2Q9NZR1 351 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ZNF229Q9UJW7 825 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ZMYM4Q5VZL5 1548 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 IGSF9BQ9UPX0 1349 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 LOC100653049A0A140TA62 436 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 KRT34O76011 436 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 OR52Z1P0C646 297 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 S100A12P80511 92 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 MEI1Q5TIA1 1274 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 BRD9Q9H8M2 597 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 IRF6O14896 467 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 HAT1O14929 419 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 OCM2P0CE71 109 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 OCMP0CE72 109 aaPredicted RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 PSMC3P17980 439 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 PAMP19021 973 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 GTF2H1P32780 548 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 GRM4Q14833 912 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 PIGWQ7Z7B1 504 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 SPATA6LQ8N4H0 392 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 DDX56Q9NY93 547 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 FADS3Q9Y5Q0 445 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 RGS20O76081 388 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ATP4AP20648 1035 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 RRM2P31350 389 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 MEA1Q16626 185 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 FAM45BPQ6NSW5 357 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 FBXL13Q8NEE6 735 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ZBTB18Q99592 522 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 STK33Q9BYT3 514 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 SLC6A15Q9H2J7 730 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 KRT36O76013 467 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 SKIV2L2P42285 1042 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 BTDP43251 543 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ARL4CP56559 192 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 PTPRNQ16849 979 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 FAM26FQ5R3K3 315 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 SNX31Q8N9S9 440 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 TTC29Q8NA56 475 aaPredicted RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 COG4Q9H9E3 785 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 KANSL3Q9P2N6 904 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 PPARGC1AQ9UBK2 798 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 GAKO14976 1311 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 TGFB1I1O43294 461 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 PLS3P13797 630 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 GPD2P43304 727 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 CDH24Q86UP0 819 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 RNF135Q8IUD6 432 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 MRPL48Q96GC5 212 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 TAAR1Q96RJ0 339 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 AGPAT1Q99943 283 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 SIX2Q9NPC8 291 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 COL17A1Q9UMD9 1497 aaPredicted RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 AATKQ6ZMQ8 1374 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 WEE2P0C1S8 567 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 NFKBIAP25963 317 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 TRMT5Q32P41 509 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 KLC2Q9H0B6 622 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 RAB20Q9NX57 234 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 NPR3P17342 541 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 BRCC3P46736 316 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 CMPK2Q5EBM0 449 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 EMC10Q5UCC4 262 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ZBTB49Q6ZSB9 765 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 BRSK2Q8IWQ3 736 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 FAM178BQ8IXR5 827 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 TEX19Q8NA77 164 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 GIPC3Q8TF64 312 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 EIF2AK1Q9BQI3 630 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 INPP5FQ9Y2H2 1132 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 PCDHA2Q9Y5H9 948 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ADGRA3Q8IWK6 1321 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 GNPATO15228 680 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 MED7O43513 233 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 AVILO75366 819 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ARL1P40616 181 aaPredicted RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 EFR3AQ14156 821 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 UTS2BQ765I0 119 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 FRMD5Q7Z6J6 570 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 UBA3Q8TBC4 463 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 DEPDC7Q96QD5 511 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 MRPL39Q9NYK5 338 aaKnown RBP3.19□□□□□ -1.9
NEB-220ENST00000618972 TCRBV7S3A2A0A539 114 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 ARHGEF37A1IGU5 675 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 IFNB1P01574 187 aa3.19□□□□□ -1.9
NEB-220ENST00000618972 HOXB7P09629 217 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms