RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 IYDQ6PHW0 289 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 ARCQ7LC44 396 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 NIF3L1Q9GZT8 377 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 KIAA1683Q9H0B3 1180 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 KIAA1257Q9ULG3 409 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 AP3M1Q9Y2T2 418 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 SNX13Q9Y5W8 968 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 UMODL1Q5DID0 1318 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 MAFGO15525 162 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 PTPRN2Q92932 1015 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 ZNF560Q96MR9 790 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 RMDN3Q96TC7 470 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 DRG1Q9Y295 367 aaKnown RBP10.64□□□□□ -0.71
CUL4A-212ENST00000617546 HNRNPCL2B2RXH8 293 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 PYGLP06737 847 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 RASA1P20936 1047 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 GARTP22102 1010 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 PPM1FP49593 454 aaPredicted RBP10.64□□□□□ -0.71
CUL4A-212ENST00000617546 HSD17B4P51659 736 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 KCTD2Q14681 263 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 MROH9Q5TGP6 573 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 AGAP9Q5VTM2 703 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 CCDC60Q8IWA6 550 aaPredicted RBP10.64□□□□□ -0.71
CUL4A-212ENST00000617546 NLGN1Q8N2Q7 840 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 FAM71DQ8N9W8 422 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 SNX19Q92543 992 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 VPS50Q96JG6 964 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 RUBCNLQ9H714 662 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 OSGEPQ9NPF4 335 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 CPA3P15088 417 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 KCNA2P16389 499 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 TGM2P21980 687 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 RAD23AP54725 363 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 PPP4CP60510 307 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 MYL6P60660 151 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 CUL2Q13617 745 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 XKR3Q5GH77 459 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 THEMIS2Q5TEJ8 643 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 HES6Q96HZ4 224 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 SH3GL1Q99961 368 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 CPVLQ9H3G5 476 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 CSADQ9Y600 493 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 MAGEB16A2A368 324 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 H3BNX3 289 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 SGPL1O95470 568 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 GALNT15Q8N3T1 639 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 SKA2Q8WVK7 121 aaPredicted RBP10.64□□□□□ -0.71
CUL4A-212ENST00000617546 FAM162AQ96A26 154 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 TNIP3Q96KP6 325 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 UBXN6Q9BZV1 441 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 GABBR1Q9UBS5 961 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 SQORQ9Y6N5 450 aa10.64□□□□□ -0.71
CUL4A-212ENST00000617546 NWD1Q149M9 1564 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 HUS1O60921 280 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 CBX6O95503 412 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 SLC1A6P48664 564 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 CHRNB3Q05901 458 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 DOK7Q18PE1 504 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 KATNAL2Q8IYT4 538 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 ZNF34Q8IZ26 560 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 SLC44A5Q8NCS7 719 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 BORCS5Q969J3 196 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 KLHL11Q9NVR0 708 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 RRN3Q9NYV6 651 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 PRPF19Q9UMS4 504 aaKnown RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 MAGED2Q9UNF1 606 aaPredicted RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 ZMYM2Q9UBW7 1377 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 BIRC5O15392 142 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 RARAP10276 462 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 ALDH1A3P47895 512 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 GRTP1Q5TC63 336 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 GJB7Q6PEY0 223 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 ZCCHC7Q8N3Z6 543 aaKnown RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 FNIP1Q8TF40 1166 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 ELMO2Q96JJ3 720 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 APOL4Q9BPW4 351 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 TRIM54Q9BYV2 358 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 UBE2OQ9C0C9 1292 aaKnown RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 LRRC40Q9H9A6 602 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 TCF7L2Q9NQB0 619 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 POLE3Q9NRF9 147 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 NOD1Q9Y239 953 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 LMTK3Q96Q04 1460 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 DDX3XO00571 662 aaKnown RBP eCLIP10.63□□□□□ -0.717e-10■□□□□ 9.6
CUL4A-212ENST00000617546 OPLAHO14841 1288 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 PHGDHO43175 533 aaKnown RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 RPS6KA3P51812 740 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 TBC1D10BQ4KMP7 808 aaPredicted RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 RWDD4Q6NW29 188 aaKnown RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 SLC22A9Q8IVM8 553 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 RFWD2Q8NHY2 731 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 VPS33AQ96AX1 596 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 KAZALD1Q96I82 304 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 BDH2Q9BUT1 245 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 SSU72Q9NP77 194 aaKnown RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 SLAIN2Q9P270 581 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 A0A0G2JLW4 131 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 ATMINO43313 823 aaPredicted RBP10.63□□□□□ -0.71
CUL4A-212ENST00000617546 MAGEC1O60732 1142 aa10.63□□□□□ -0.71
CUL4A-212ENST00000617546 PYGMP11217 842 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms