RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 ATAT1Q5SQI0 421 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 GPR149Q86SP6 731 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 GIPC2Q8TF65 315 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 TFAP2BQ92481 460 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 SMG7Q92540 1137 aaKnown RBP17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 IQCDQ96DY2 449 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 DUSP16Q9BY84 665 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 HESX1Q9UBX0 185 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 MUTYHQ9UIF7 546 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 ZDBF2Q9HCK1 2354 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 VPS13AQ96RL7 3174 aa17.36■□□□□ 0.37
SPTSSB-204ENST00000617024 THAP12O43422 761 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 CALCAP01258 141 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 PNMA6AP0CW24 399 aaPredicted RBP17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 PTPN2P17706 415 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 BRD2P25440 801 aaKnown RBP17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 GNA15P30679 374 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 GPR15P49685 360 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 SLC8A3P57103 927 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 LCLAT1Q6UWP7 414 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 ITIH5Q86UX2 942 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 ANKRD52Q8NB46 1076 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 PRSS33Q8NF86 280 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 ZNF606Q8WXB4 792 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 ZNF707Q96C28 371 aaPredicted RBP17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 SPATA17Q96L03 361 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 C8orf48Q96LL4 319 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 CEP295NLQ96MC4 621 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 KRT82Q9NSB4 513 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 MYO6Q9UM54 1294 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 KMT2EQ8IZD2 1858 aa17.35■□□□□ 0.37
SPTSSB-204ENST00000617024 F8VP50 259 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 O00370 1275 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 GFPT2O94808 682 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 CSH1P0DML2 217 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 CSH2P0DML3 217 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 ATF6P18850 670 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 MTHFRP42898 656 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 CACNA2D1P54289 1103 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 MAP3K7CLP57077 242 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 GOLGA7BQ2TAP0 167 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 SDHAF4Q5VUM1 108 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 SPECC1LQ69YQ0 1117 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 ITIH6Q6UXX5 1313 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 DNAJB7Q7Z6W7 309 aaPredicted RBP17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 SLC47A2Q86VL8 602 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 FMNL3Q8IVF7 1028 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 SMRP1Q8NCR6 262 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 ZNF397Q8NF99 534 aaPredicted RBP17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 GPR152Q8TDT2 470 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 CPLX3Q8WVH0 158 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 RIPOR3Q96MK2 946 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 KCNK16Q96T55 309 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 SMOQ99835 787 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 CSNK1G1Q9HCP0 422 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 DMAP1Q9NPF5 467 aaPredicted RBP17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 ACP6Q9NPH0 428 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 TSPAN16Q9UKR8 245 aa17.34■□□□□ 0.37
SPTSSB-204ENST00000617024 A0A1W2PQJ5 194 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 SLC38A8A6NNN8 435 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 MICAL2O94851 1124 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 CCDC172P0C7W6 258 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 NPR3P17342 541 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 KRT9P35527 623 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 SMAD2Q15796 467 aaKnown RBP17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 CLEC20AQ6ZU45 233 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 VSTM4Q8IW00 320 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 UBA3Q8TBC4 463 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 PSMG2Q969U7 264 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 ZSWIM1Q9BR11 485 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 CORO1BQ9BR76 489 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 UBXN6Q9BZV1 441 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 TTYH3Q9C0H2 523 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 DNMT3BQ9UBC3 853 aaKnown RBP17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 CAPN11Q9UMQ6 739 aa17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.33■□□□□ 0.36
SPTSSB-204ENST00000617024 CACNA1HO95180 2353 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 ZFHX2Q9C0A1 2572 aaPredicted RBP17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 SPTBN4Q9H254 2564 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 MBTPS2O43462 519 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 BEST1O76090 585 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 ZNF75DP51815 510 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 BCAT1P54687 386 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 BST2Q10589 180 aaKnown RBP17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 SMAD4Q13485 552 aaKnown RBP17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 IER5LQ5T953 404 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 DENND5BQ6ZUT9 1274 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 GRASPQ7Z6J2 395 aaPredicted RBP17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 TTC30AQ86WT1 665 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 NUP93Q8N1F7 819 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 BAP1Q92560 729 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 NUCKS1Q9H1E3 243 aaKnown RBP17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 TMEM30AQ9NV96 361 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 HCFC1R1Q9NWW0 138 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 EHD2Q9NZN4 543 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 FAM50BQ9Y247 325 aa17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 LUC7L2Q9Y383 392 aaKnown RBP17.32■□□□□ 0.36
SPTSSB-204ENST00000617024 MYH10P35580 1976 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms