RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 HPCAP84074 193 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 MCL1Q07820 350 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 SEC23AQ15436 765 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 KCNT1Q5JUK3 1230 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 SV2AQ7L0J3 742 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 PCSK9Q8NBP7 692 aaKnown RBP18.37■□□□□ 0.53
ATXN2-227ENST00000616825 ARRDC4Q8NCT1 418 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 WWOXQ9NZC7 414 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 HPSEQ9Y251 543 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 H3BRB1 525 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 TIMM44O43615 452 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 EPB42P16452 691 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 VCAM1P19320 739 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 KLC1Q07866 573 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 KAZALD1Q96I82 304 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 KCTD10Q9H3F6 313 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 TUT1Q9H6E5 874 aaKnown RBP18.37■□□□□ 0.53
ATXN2-227ENST00000616825 CCT8L1PA6NM43 557 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 ARHGEF9O43307 516 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 CXCL9Q07325 125 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 SLFN11Q7Z7L1 901 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 SRLQ86TD4 932 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 ATG4AQ8WYN0 398 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 TRPM5Q9NZQ8 1165 aa18.37■□□□□ 0.53
ATXN2-227ENST00000616825 TBC1D4O60343 1298 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 TGFB3P10600 412 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 HSD17B3P37058 310 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 NEK2P51955 445 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 METTL7BQ6UX53 244 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 COL23A1Q86Y22 540 aaPredicted RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 P3H2Q8IVL5 708 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 SUGP1Q8IWZ8 645 aaKnown RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 B4GALNT2Q8NHY0 566 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 SYTL5Q8TDW5 730 aaPredicted RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 ECSITQ9BQ95 431 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 RTFDC1Q9BY42 306 aaPredicted RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 RIOX1Q9H6W3 641 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 LRRC40Q9H9A6 602 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 H2AFY2Q9P0M6 372 aaPredicted RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 PRLRP16471 622 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 SOX11P35716 441 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 CSE1LP55060 971 aaKnown RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 OOSP2Q86WS3 158 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 FAM131BQ86XD5 332 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 ATP8B4Q8TF62 1192 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 FAM172AQ8WUF8 416 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 SRPK1Q96SB4 655 aaKnown RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 VWA5AO00534 786 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 NFIBO00712 420 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 AKAP3O75969 853 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 CD44P16070 742 aaKnown RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 RAP1GDS1P52306 607 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 ATXN3P54252 364 aaPredicted RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 ORC1Q13415 861 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 BFSP2Q13515 415 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 FBXO16Q8IX29 292 aaPredicted RBP18.36■□□□□ 0.53
ATXN2-227ENST00000616825 KCNB2Q92953 911 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 NSL1Q96IY1 281 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 FAM111AQ96PZ2 611 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 CISHQ9NSE2 258 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 DTNAQ9Y4J8 743 aa18.36■□□□□ 0.53
ATXN2-227ENST00000616825 DDTLA6NHG4 134 aaPredicted RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 ZBTB39O15060 712 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 GLRA3O75311 464 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 VPS26AO75436 327 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 FBXO21O94952 628 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 EGFRP00533 1210 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 PTPN11Q06124 597 aaPredicted RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 DDX39BQ13838 428 aaKnown RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 PRPF39Q86UA1 669 aaKnown RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 CCDC126Q96EE4 140 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 PAWRQ96IZ0 340 aaKnown RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 NMRK1Q9NWW6 199 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 RARGP13631 454 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 FGFR2P21802 821 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 TIGD7Q6NT04 549 aaPredicted RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 FAM162AQ96A26 154 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 TUBGCP3Q96CW5 907 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 IL1RL2Q9HB29 575 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 KCNA4P22459 653 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 MZF1P28698 734 aaPredicted RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 TOB1P50616 345 aaPredicted RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 ERVK-24P63145 666 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 FAM83AQ86UY5 434 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 REXO1L1PQ8IX06 675 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 ADGRF2Q8IZF7 708 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 C3orf20Q8ND61 904 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 GMCL1P1Q8NEA9 526 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 C6orf203Q9P0P8 240 aaPredicted RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 DEAF1O75398 565 aaPredicted RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 RUNX1T1Q06455 604 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 CTXN3Q4LDR2 81 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 PAN2Q504Q3 1202 aaKnown RBP18.35■□□□□ 0.53
ATXN2-227ENST00000616825 NYAP1Q6ZVC0 841 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 CACNA2D2Q9NY47 1150 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 DSEQ9UL01 958 aa18.35■□□□□ 0.53
ATXN2-227ENST00000616825 PROSCO94903 275 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms