RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 PJA2O43164 708 aa9.48□□□□□ -0.89
SPTBN1-207ENST00000615901 AKT1P31749 480 aa9.48□□□□□ -0.89
SPTBN1-207ENST00000615901 CLCN3P51790 818 aa9.48□□□□□ -0.89
SPTBN1-207ENST00000615901 CCDC15Q0P6D6 951 aa9.48□□□□□ -0.89
SPTBN1-207ENST00000615901 SLC30A10Q6XR72 485 aa9.48□□□□□ -0.89
SPTBN1-207ENST00000615901 SLFN11Q7Z7L1 901 aa9.48□□□□□ -0.89
SPTBN1-207ENST00000615901 OR9Q1Q8NGQ5 310 aa9.48□□□□□ -0.89
SPTBN1-207ENST00000615901 RNF103-CHMP3A0A140T963 221 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 O00370 1275 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 STRNO43815 780 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 PCDHGB4Q9UN71 923 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SNX5Q9Y5X3 404 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 VGLL3A8MV65 326 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 HNRNPRO43390 633 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ZNF286BP0CG31 522 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 HSPA1AP0DMV8 641 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 HSPA1BP0DMV9 641 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 CDH18Q13634 790 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 C9orf131Q5VYM1 1079 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 UBA3Q8TBC4 463 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 CCDC126Q96EE4 140 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 PACSIN1Q9BY11 444 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 NRXN3Q9Y4C0 1643 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 RAD23BP54727 409 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 PTENP60484 403 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 FAM83EQ2M2I3 478 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SZRD1Q7Z422 152 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ANLNQ9NQW6 1124 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 DDIT4Q9NX09 232 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 CAPN6Q9Y6Q1 641 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SYCE1LA8MT33 242 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 RARGP13631 454 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 RPL10AP62906 217 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 MAP3K10Q02779 954 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 DDX53Q86TM3 631 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 MTMR9Q96QG7 549 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 CYP4F11Q9HBI6 524 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 CCT8L1PA6NM43 557 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 CYB561D2O14569 222 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ZNF135P52742 658 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SLC12A3P55017 1021 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ST3GAL1Q11201 340 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 TWF1Q12792 350 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 IL31Q6EBC2 164 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 RPAINQ86UA6 219 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 TAS1R2Q8TE23 839 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 TMEM176AQ96HP8 235 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ASB7Q9H672 318 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 STX18Q9P2W9 335 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 DRG1Q9Y295 367 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ENO1P06733 434 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 KCNA1Q09470 495 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 GRIK4Q16099 956 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 CCNG2Q16589 344 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 FOXR2Q6PJQ5 311 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 DENND5BQ6ZUT9 1274 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 NLRP9Q7RTR0 991 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SLC47A2Q86VL8 602 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 OPTNQ96CV9 577 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 AGAP3Q96P47 875 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ARHGAP26Q9UNA1 814 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 PHF20L1A8MW92 1017 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 CASP4P49662 377 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 TBX2Q13207 712 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 THEMIS2Q5TEJ8 643 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ZNF669Q96BR6 464 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SIKE1Q9BRV8 207 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SLC30A1Q9Y6M5 507 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ARFGEF2Q9Y6D5 1785 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 TRIM49D1C9J1S8 452 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 H2AFXP16104 143 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 NR2C2P49116 596 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 LVRNQ6Q4G3 990 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 UNC45BQ8IWX7 931 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SLC35C1Q96A29 364 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 ERP27Q96DN0 273 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 TSC22D3Q99576 134 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 KCNMB3Q9NPA1 279 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 DDX4Q9NQI0 724 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 SLC24A2Q9UI40 661 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 AP4E1Q9UPM8 1137 aa9.47□□□□□ -0.89
SPTBN1-207ENST00000615901 F5H5T6 163 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 CCND1P24385 295 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 DDR1Q08345 913 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 BFSP2Q13515 415 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 SPDYCQ5MJ68 293 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 DAB2IPQ5VWQ8 1189 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 LRRC43Q8N309 656 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 DACT3Q96B18 629 aaPredicted RBP9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 PDGFCQ9NRA1 345 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 WNT10BO00744 389 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 PRPF4O43172 522 aaKnown RBP eCLIP9.46□□□□□ -0.891e-7■□□□□ 9.5
SPTBN1-207ENST00000615901 VCPP55072 806 aaKnown RBP9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 PPATQ06203 517 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 SLC29A2Q14542 456 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 SRLQ86TD4 932 aa9.46□□□□□ -0.89
SPTBN1-207ENST00000615901 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms