RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 HOMER3Q9NSC5 361 aa20.11■□□□□ 0.81
MMP28-204ENST00000615136 C5orf60A6NFR6 353 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 ADAMTS4O75173 837 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 GABBR2O75899 941 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 GAS8O95995 478 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 KCNE1P15382 129 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 LMO2P25791 158 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 ZNF268Q14587 947 aaPredicted RBP20.1■□□□□ 0.81
MMP28-204ENST00000615136 PKDCCQ504Y2 493 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 FAM47CQ5HY64 1035 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 KCNT1Q5JUK3 1230 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 PMF1Q6P1K2 205 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 TAF2Q6P1X5 1199 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 PRUNE1Q86TP1 453 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 OR6B3Q8NGW1 331 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 TMEM88BA6NKF7 163 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 PTGESO14684 152 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 RGS16O15492 202 aaPredicted RBP20.1■□□□□ 0.81
MMP28-204ENST00000615136 SEPT4O43236 478 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 CHRNA1P02708 482 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 ATF7P17544 494 aaPredicted RBP20.1■□□□□ 0.81
MMP28-204ENST00000615136 AFF1P51825 1210 aaKnown RBP20.1■□□□□ 0.81
MMP28-204ENST00000615136 FBXO47Q5MNV8 452 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 SH3PXD2AQ5TCZ1 1133 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 LRRC38Q5VT99 294 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 MFSD5Q6N075 450 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 SPOCD1Q6ZMY3 1216 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 FAM183BPQ6ZVS7 135 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 RCOR2Q8IZ40 523 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 ZWILCHQ9H900 591 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 ASIC3Q9UHC3 531 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 NEU2Q9Y3R4 380 aa20.1■□□□□ 0.81
MMP28-204ENST00000615136 GRAP2O75791 330 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 PDGFRBP09619 1106 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 TAF5Q15542 800 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 FAM102AQ5T9C2 384 aaPredicted RBP20.09■□□□□ 0.81
MMP28-204ENST00000615136 ATL2Q8NHH9 583 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 EPS8L3Q8TE67 593 aaKnown RBP20.09■□□□□ 0.81
MMP28-204ENST00000615136 ADAM7Q9H2U9 754 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 CDC42EP4Q9H3Q1 356 aaKnown RBP20.09■□□□□ 0.81
MMP28-204ENST00000615136 RNF186Q9NXI6 227 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 WDR35Q9P2L0 1181 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 ST3GAL5Q9UNP4 418 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 LRRD1A4D1F6 860 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 C3orf70A6NLC5 250 aaPredicted RBP20.09■□□□□ 0.81
MMP28-204ENST00000615136 KPNA7A9QM74 516 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 KIF3CO14782 793 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 RARBP10826 455 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 CAV1Q03135 178 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 CCNG2Q16589 344 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 CCDC142Q17RM4 750 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 ERMARDQ5T6L9 678 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 ROPN1BQ9BZX4 212 aaPredicted RBP20.09■□□□□ 0.81
MMP28-204ENST00000615136 STMN4Q9H169 189 aaPredicted RBP20.09■□□□□ 0.81
MMP28-204ENST00000615136 ROPN1Q9HAT0 212 aaPredicted RBP20.09■□□□□ 0.81
MMP28-204ENST00000615136 KIAA1257Q9ULG3 409 aa20.09■□□□□ 0.81
MMP28-204ENST00000615136 KPNA6O60684 536 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 ASGR1P07306 291 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 CDKN2BP42772 138 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 OR6B2Q6IFH4 312 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 C6orf89Q6UWU4 347 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 TTC39CQ8N584 583 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 FNIP1Q8TF40 1166 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 RBM41Q96IZ5 413 aaKnown RBP20.08■□□□□ 0.8
MMP28-204ENST00000615136 CCDC114Q96M63 670 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 XPO6Q96QU8 1125 aaKnown RBP20.08■□□□□ 0.8
MMP28-204ENST00000615136 FAM124BQ9H5Z6 455 aaPredicted RBP20.08■□□□□ 0.8
MMP28-204ENST00000615136 XPNPEP3Q9NQH7 507 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 PCSK1NQ9UHG2 260 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 TRPV2Q9Y5S1 764 aa20.08■□□□□ 0.8
MMP28-204ENST00000615136 hCG_1818297A0A087WSY0 165 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 TLDC2A0PJX2 215 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 A8MXQ7 604 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 RASGRF2O14827 1237 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 KIAA0754O94854 1291 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 CD48P09326 243 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 CCDC130P13994 396 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 SERINC5Q86VE9 423 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 CCDC25Q86WR0 208 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 GSTCDQ8NEC7 633 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 LPPQ93052 612 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 HAUS1Q96CS2 278 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 SENP6Q9GZR1 1112 aaPredicted RBP20.07■□□□□ 0.8
MMP28-204ENST00000615136 CD4P01730 458 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 ATF2P15336 505 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 CHKAP35790 457 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 VPS41P49754 854 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 IFI35P80217 286 aaPredicted RBP20.07■□□□□ 0.8
MMP28-204ENST00000615136 PDE4CQ08493 712 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 AUHQ13825 339 aaKnown RBP20.07■□□□□ 0.8
MMP28-204ENST00000615136 KCNA10Q16322 511 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 GLIS1Q8NBF1 620 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 SMC1BQ8NDV3 1235 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 MDM1Q8TC05 714 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 SLC35F5Q8WV83 523 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 PEBP4Q96S96 227 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 TRAIPQ9BWF2 469 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 B3GNT5Q9BYG0 378 aa20.07■□□□□ 0.8
MMP28-204ENST00000615136 AGO3Q9H9G7 860 aaKnown RBP20.07■□□□□ 0.8
MMP28-204ENST00000615136 PRKAR2AP13861 404 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms