RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 NSMFQ6X4W1 530 aa12.48□□□□□ -0.41
TP53-220ENST00000610623 ZFRQ96KR1 1074 aaKnown RBP12.48□□□□□ -0.41
TP53-220ENST00000610623 USP29Q9HBJ7 922 aa12.48□□□□□ -0.41
TP53-220ENST00000610623 PLK2Q9NYY3 685 aa12.48□□□□□ -0.41
TP53-220ENST00000610623 ARMCX1Q9P291 453 aa12.48□□□□□ -0.41
TP53-220ENST00000610623 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
TP53-220ENST00000610623 PRR12Q9ULL5 1215 aa12.48□□□□□ -0.41
TP53-220ENST00000610623 ARHGAP10A1A4S6 786 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 PEX1O43933 1283 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 ENO1P06733 434 aaKnown RBP12.47□□□□□ -0.41
TP53-220ENST00000610623 CIITAP33076 1130 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 CPA2P48052 419 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 CDK18Q07002 472 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
TP53-220ENST00000610623 EPC2Q52LR7 807 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 RBM44Q6ZP01 1051 aaKnown RBP12.47□□□□□ -0.41
TP53-220ENST00000610623 ZNF720Q7Z2F6 126 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 ZBED8Q8IZ13 594 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 ZNF454Q8N9F8 522 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 PRR7Q8TB68 274 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 CHURC1Q8WUH1 139 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 FAM20AQ96MK3 541 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 UIMC1Q96RL1 719 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 DHRS4Q9BTZ2 278 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 PARVGQ9HBI0 331 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 FER1L6Q2WGJ9 1857 aa12.47□□□□□ -0.41
TP53-220ENST00000610623 SFI1A8K8P3 1242 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 CLPTM1O96005 669 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 CYP3A4P08684 503 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 SMIM18P0DKX4 95 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 FDX1P10109 184 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 YY1P25490 414 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 SERPINB8P50452 374 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 TGFB2P61812 414 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 PHEXP78562 749 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 TBL3Q12788 808 aaKnown RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 MSLNQ13421 630 aaPredicted RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 FASTKD3Q14CZ7 662 aaKnown RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 KLHL38Q2WGJ6 581 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 USH1GQ495M9 461 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 KLHDC10Q6PID8 442 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 KSR1Q8IVT5 923 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 SMYD1Q8NB12 490 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 GIPC2Q8TF65 315 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 MZB1Q8WU39 189 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 GAB3Q8WWW8 586 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 SREK1Q8WXA9 508 aaKnown RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 DNAJC1Q96KC8 554 aaKnown RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 IKZF4Q9H2S9 585 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 SLC17A7Q9P2U7 560 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 DMTF1Q9Y222 760 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 EMSYQ7Z589 1322 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 IPO5O00410 1097 aaKnown RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 PSTPIP1O43586 416 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 TFAP2AP05549 437 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 STIP1P31948 543 aaKnown RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 CD97P48960 835 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 EMP3P54852 163 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 DLG1Q12959 904 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 MPP3Q13368 585 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 ADRM1Q16186 407 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 EFHC1Q5JVL4 640 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 DRICH1Q6PGQ1 229 aaPredicted RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 SLC47A2Q86VL8 602 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 TREML1Q86YW5 311 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 JADE3Q92613 823 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 HLA-CQ95604 372 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 ABTB1Q969K4 478 aaPredicted RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 ZBED3Q96IU2 234 aaPredicted RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 CLPTM1LQ96KA5 538 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 SLX1AQ9BQ83 275 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 HEMGNQ9BXL5 484 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 PDGFDQ9GZP0 370 aaPredicted RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 BCAS3Q9H6U6 928 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 AVENQ9NQS1 362 aaPredicted RBP12.46□□□□□ -0.41
TP53-220ENST00000610623 PIM2Q9P1W9 311 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 THEGQ9P2T0 379 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 SHOC2Q9UQ13 582 aa12.46□□□□□ -0.41
TP53-220ENST00000610623 C15orf38-AP3S2A0A0A6YYH1 394 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 PMM2O15305 246 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 CYP26A1O43174 497 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 LPXNO60711 386 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 PGM3O95394 542 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 CYP11B1P15538 503 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 ETV4P43268 484 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 MFAP3P55082 362 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 AQP4P55087 323 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 TMEM62Q0P6H9 643 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 TMED1Q13445 227 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 DUS1LQ6P1R4 473 aaKnown RBP12.45□□□□□ -0.42
TP53-220ENST00000610623 BORAQ6PGQ7 559 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 ARPINQ7Z6K5 226 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 ALYREFQ86V81 257 aaKnown RBP12.45□□□□□ -0.42
TP53-220ENST00000610623 NUP93Q8N1F7 819 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 MARVELD2Q8N4S9 558 aa12.45□□□□□ -0.42
TP53-220ENST00000610623 ICA1LQ8NDH6 482 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms