RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 FAM186BQ8IYM0 893 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 RIN3Q8TB24 985 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 SDCBP2Q9H190 292 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 DPEP3Q9H4B8 488 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 SLITRK6Q9H5Y7 841 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 SMYD3Q9H7B4 428 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 ABCB6Q9NP58 842 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 ARMCX3Q9UH62 379 aaPredicted RBP12.3□□□□□ -0.44
LINC00539-204ENST00000608957 CDH9Q9ULB4 789 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 FRMD4BQ9Y2L6 1034 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 KANSL1LA0AUZ9 987 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 SLC38A8A6NNN8 435 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 TACC1O75410 805 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 NOL4O94818 638 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 PSMC3P17980 439 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 PCSK1P29120 753 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 GDI1P31150 447 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 RAP1GAPP47736 663 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 PFKPQ01813 784 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 PRKCQQ04759 706 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 FZD5Q13467 585 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 WDR72Q3MJ13 1102 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 CFAP221Q4G0U5 840 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 HS1BP3Q53T59 392 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 SPECC1LQ69YQ0 1117 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 TRMT61BQ9BVS5 477 aaKnown RBP12.29□□□□□ -0.44
LINC00539-204ENST00000608957 SLC46A2Q9BY10 475 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 GPR88Q9GZN0 384 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 SMG9Q9H0W8 520 aaKnown RBP12.29□□□□□ -0.44
LINC00539-204ENST00000608957 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 TASP1Q9H6P5 420 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 VRTNQ9H8Y1 702 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 LTB4R2Q9NPC1 389 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 SIT1Q9Y3P8 196 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00539-204ENST00000608957 KIAA1549LQ6ZVL6 1849 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 PIEZO1Q92508 2521 aa12.29□□□□□ -0.44
LINC00539-204ENST00000608957 MAPK13O15264 365 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 FGF19O95750 216 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 CSH1P0DML2 217 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 CSH2P0DML3 217 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 BDNFP23560 247 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 WEE1P30291 646 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 CDC25CP30307 473 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 ATICP31939 592 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 CACNA2D1P54289 1103 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 CDH8P55286 799 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 GSDMDP57764 484 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 FCHO2Q0JRZ9 810 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 TRPC3Q13507 836 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 NCOA4Q13772 614 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 ANGPT1Q15389 498 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 ZACNQ401N2 412 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 DCAF17Q5H9S7 520 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-204ENST00000608957 MDH1BQ5I0G3 518 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 WDR44Q5JSH3 913 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 SCARA5Q6ZMJ2 495 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 CCDC186Q7Z3E2 898 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 SPATA2LQ8IUW3 424 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-204ENST00000608957 CCDC150Q8NCX0 1101 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 TMC2Q8TDI7 906 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 DEPDC1BQ8WUY9 529 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 ATOH1Q92858 354 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-204ENST00000608957 DNASE1L2Q92874 299 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 PCED1BQ96HM7 432 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 FUBP3Q96I24 572 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00539-204ENST00000608957 BRD9Q9H8M2 597 aa12.28□□□□□ -0.44
LINC00539-204ENST00000608957 NXF1Q9UBU9 619 aaKnown RBP12.28□□□□□ -0.44
LINC00539-204ENST00000608957 MAGED2Q9UNF1 606 aaPredicted RBP12.28□□□□□ -0.44
LINC00539-204ENST00000608957 R3HCC1Q9Y3T6 440 aaKnown RBP12.28□□□□□ -0.44
LINC00539-204ENST00000608957 MYO15AQ9UKN7 3530 aa12.27□□□□□ -0.44
LINC00539-204ENST00000608957 FAM170BA6NMN3 283 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 CLDN5O00501 218 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 PHACTR2O75167 634 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 AFPP02771 609 aaKnown RBP12.27□□□□□ -0.45
LINC00539-204ENST00000608957 FAM163BP0C2L3 166 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 TRIM49P0CI25 452 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 TRIM49CP0CI26 452 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 KRT13P13646 458 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 RFX1P22670 979 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 GNL1P36915 607 aaPredicted RBP12.27□□□□□ -0.45
LINC00539-204ENST00000608957 MAGEA11P43364 429 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 VAMP7P51809 220 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 USP46P62068 366 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 RPL10AP62906 217 aaKnown RBP12.27□□□□□ -0.45
LINC00539-204ENST00000608957 TNNC1P63316 161 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 PPP3CAQ08209 521 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 TBX2Q13207 712 aaPredicted RBP12.27□□□□□ -0.45
LINC00539-204ENST00000608957 BIRC3Q13489 604 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 TRIM14Q14142 442 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 UBXN2BQ14CS0 331 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 ZNF699Q32M78 642 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 ARHGAP15Q53QZ3 475 aa12.27□□□□□ -0.45
LINC00539-204ENST00000608957 TXNDC8Q6A555 127 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms