RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 PHACTR2O75167 634 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 CCDC192P0DO97 292 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 ATF6P18850 670 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 MPLP40238 635 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 ALDH1A3P47895 512 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 EPHB3P54753 998 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 PSMC1P62191 440 aaKnown RBP14.56□□□□□ -0.08
CTSA-218ENST00000607814 MYO1EQ12965 1108 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 BIRC3Q13489 604 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 KCNB1Q14721 858 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 PON2Q15165 354 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 STXBP5Q5T5C0 1151 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 RNF43Q68DV7 783 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 PSAPL1Q6NUJ1 521 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 DNAJB7Q7Z6W7 309 aaPredicted RBP14.56□□□□□ -0.08
CTSA-218ENST00000607814 GOLGA5Q8TBA6 731 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 PARD3BQ8TEW8 1205 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 KBTBD7Q8WVZ9 684 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 MRPL45Q9BRJ2 306 aaKnown RBP14.56□□□□□ -0.08
CTSA-218ENST00000607814 MMRN2Q9H8L6 949 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 GDAP2Q9NXN4 497 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 CGNQ9P2M7 1197 aaKnown RBP14.56□□□□□ -0.08
CTSA-218ENST00000607814 NUP210Q8TEM1 1887 aaPredicted RBP14.55□□□□□ -0.08
CTSA-218ENST00000607814 VNN1O95497 513 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 TRIM49P0CI25 452 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 TRIM49CP0CI26 452 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 PAX3P23760 479 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 NR2F2P24468 414 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 CYP2F1P24903 491 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 PRCPP42785 496 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 CDH8P55286 799 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 TRPC3Q13507 836 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 CCDC6Q16204 474 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 DDR2Q16832 855 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 ITPRIPL2Q3MIP1 535 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 WDR72Q3MJ13 1102 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 C1orf220Q5T0J3 134 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 TOP6BLQ8N6T0 577 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 MKNK1Q9BUB5 465 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 THG1LQ9NWX6 298 aaKnown RBP14.55□□□□□ -0.08
CTSA-218ENST00000607814 HSFX1Q9UBD0 423 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 ZMYM5Q9UJ78 669 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 SLC8A2Q9UPR5 921 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 TRAF3IP3Q9Y228 551 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 ITPR1Q14643 2758 aa14.55□□□□□ -0.08
CTSA-218ENST00000607814 C1QTNF9BB2RNN3 333 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 BIN1O00499 593 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 PRPF40AO75400 957 aaKnown RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 C4BPAP04003 597 aaKnown RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 C1QTNF9P0C862 333 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 HAPLN1P10915 354 aaPredicted RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 NOVA1P51513 510 aaKnown RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 PMS1P54277 932 aaKnown RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 MYL7Q01449 175 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 TSPY1Q01534 308 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 GRSF1Q12849 480 aaKnown RBP eCLIP14.54□□□□□ -0.08
CTSA-218ENST00000607814 ADAM9Q13443 819 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 ARHGAP15Q53QZ3 475 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 TMEM196Q5HYL7 178 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 INTS6LQ5JSJ4 861 aaKnown RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 DAB2IPQ5VWQ8 1189 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 SCARA5Q6ZMJ2 495 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 SLC9A9Q8IVB4 645 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 DCP1BQ8IZD4 617 aaKnown RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 GUF1Q8N442 669 aaKnown RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 OR6B3Q8NGW1 331 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 BPIFB1Q8TDL5 484 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 SMARCE1Q969G3 411 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 PSMG2Q969U7 264 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 LRRC3BQ96PB8 259 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 PKMYT1Q99640 499 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 ACBD6Q9BR61 282 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 DPEP3Q9H4B8 488 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 CHMP5Q9NZZ3 219 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 CIZ1Q9ULV3 898 aaPredicted RBP14.54□□□□□ -0.08
CTSA-218ENST00000607814 WASF3Q9UPY6 502 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 FRMD4BQ9Y2L6 1034 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 PCDHB5Q9Y5E4 795 aa14.54□□□□□ -0.08
CTSA-218ENST00000607814 TRIM49BA6NDI0 452 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 GABRDO14764 452 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 RHOBTB1O94844 696 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 GCLMP48507 274 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 TNNC1P63316 161 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 CYP4F8P98187 520 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 AMPD2Q01433 879 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 ORC1Q13415 861 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 NCOA4Q13772 614 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 ELF2Q15723 593 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 PLK5Q496M5 336 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 SPOPLQ6IQ16 392 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 GAREM2Q75VX8 874 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 ITIH5Q86UX2 942 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 TMEM86AQ8N2M4 240 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 ZFYVE19Q96K21 471 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 SYT15Q9BQS2 421 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 EDEM2Q9BV94 578 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 XYLT2Q9H1B5 865 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 SNX25Q9H3E2 840 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 ATXN3LQ9H3M9 355 aa14.53□□□□□ -0.08
CTSA-218ENST00000607814 SMYD3Q9H7B4 428 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms