RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 ACCSQ96QU6 501 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 PCIF1Q9H4Z3 704 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 GDF3Q9NR23 364 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 USTQ9Y2C2 406 aa11.21□□□□□ -0.61
LINC01001-203ENST00000607448 M0QZQ0 153 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 SYN3O14994 580 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 ABLIM3O94929 683 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 SEC24AO95486 1093 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 OR4Q2P0C623 313 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 CCDC172P0C7W6 258 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 MYBL2P10244 700 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 GBP2P32456 591 aaPredicted RBP11.2□□□□□ -0.62
LINC01001-203ENST00000607448 ABCD1P33897 745 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 PSMC2P35998 433 aaKnown RBP11.2□□□□□ -0.62
LINC01001-203ENST00000607448 JAM2P57087 298 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 MYBPC2Q14324 1141 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 KYAT1Q16773 422 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 PPM1LQ5SGD2 360 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 LIN9Q5TKA1 542 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 C9orf57Q5W0N0 161 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 SLFN12LQ6IEE8 588 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 GET4Q7L5D6 327 aaPredicted RBP11.2□□□□□ -0.62
LINC01001-203ENST00000607448 FAM76AQ8TAV0 307 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 RSAD2Q8WXG1 361 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 SH3GL2Q99962 352 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 RHOBTB2Q9BYZ6 727 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 PIDD1Q9HB75 910 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 ADAMTS1Q9UHI8 967 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 DPP7Q9UHL4 492 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 DMGDHQ9UI17 866 aaKnown RBP11.2□□□□□ -0.62
LINC01001-203ENST00000607448 NENFQ9UMX5 172 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 OBSL1O75147 1896 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 TMEM221A6NGB7 291 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 M0R296 226 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 PIRO00625 290 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 NRG2O14511 850 aaPredicted RBP11.2□□□□□ -0.62
LINC01001-203ENST00000607448 HSF2BPO75031 334 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 AKAP3O75969 853 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 VNN2O95498 520 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 RFX1P22670 979 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 GGCXP38435 758 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 STAT1P42224 750 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 CDR1P51861 262 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 LILRA4P59901 499 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 SIGLEC14Q08ET2 396 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 TMEM132DQ14C87 1099 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 RPS6KA1Q15418 735 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 CTXN3Q4LDR2 81 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 POTEHQ6S545 545 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 OTOP3Q7RTS5 596 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 SYCE1Q8N0S2 351 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 MREGQ8N565 214 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 ZNF461Q8TAF7 563 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 SLC35C1Q96A29 364 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 BORCS6Q96GS4 357 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 CALR3Q96L12 384 aaKnown RBP11.2□□□□□ -0.62
LINC01001-203ENST00000607448 TMEM209Q96SK2 561 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 RUFY1Q96T51 708 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 KCNK12Q9HB15 430 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 RBM12Q9NTZ6 932 aaKnown RBP11.2□□□□□ -0.62
LINC01001-203ENST00000607448 DNMT3BQ9UBC3 853 aaKnown RBP11.2□□□□□ -0.62
LINC01001-203ENST00000607448 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 POLIQ9UNA4 740 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 SORCS3Q9UPU3 1222 aa11.2□□□□□ -0.62
LINC01001-203ENST00000607448 DENND4CQ5VZ89 1909 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 GOLGA6CA6NDK9 693 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 AGPSO00116 658 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 TULP1O00294 542 aaPredicted RBP11.19□□□□□ -0.62
LINC01001-203ENST00000607448 TULP2O00295 520 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 NARSO43776 548 aaKnown RBP11.19□□□□□ -0.62
LINC01001-203ENST00000607448 HNRNPA1P09651 372 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01001-203ENST00000607448 H2AFZP0C0S5 128 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 GOLGA6DP0CG33 693 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 SLC9A1P19634 815 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 CXCR5P32302 372 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 ARID5AQ03989 594 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 PTK2Q05397 1052 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 MTMR3Q13615 1198 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 ALCAMQ13740 583 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 DCAF17Q5H9S7 520 aaPredicted RBP11.19□□□□□ -0.62
LINC01001-203ENST00000607448 LMBRD2Q68DH5 695 aaPredicted RBP11.19□□□□□ -0.62
LINC01001-203ENST00000607448 ALKBH5Q6P6C2 394 aaKnown RBP11.19□□□□□ -0.62
LINC01001-203ENST00000607448 ELMSAN1Q6PJG2 1045 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 H2AFVQ71UI9 128 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 HS2ST1Q7LGA3 356 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 ZNF571Q7Z3V5 609 aaPredicted RBP11.19□□□□□ -0.62
LINC01001-203ENST00000607448 CD302Q8IX05 232 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 FAM186BQ8IYM0 893 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 SYCP3Q8IZU3 236 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 PLCD3Q8N3E9 789 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 BEST2Q8NFU1 509 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 ITFG1Q8TB96 612 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 WHAMMQ8TF30 809 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 ACSF2Q96CM8 615 aaPredicted RBP11.19□□□□□ -0.62
LINC01001-203ENST00000607448 CRISPLD1Q9H336 500 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 ASB7Q9H672 318 aa11.19□□□□□ -0.62
LINC01001-203ENST00000607448 SIX2Q9NPC8 291 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms