RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 CFHP08603 1231 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 CSF2RAP15509 400 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ATICP31939 592 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ARL2P36404 184 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 KYAT1Q16773 422 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 HABP4Q5JVS0 413 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 SH2D3CQ8N5H7 860 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 PPP4R1Q8TF05 950 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 IFT43Q96FT9 208 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 EXOC2Q96KP1 924 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 PPP1R36Q96LQ0 422 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 CHMP2BQ9UQN3 213 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 COL4A1P02462 1669 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 AMPD1P23109 780 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 NDUFV1P49821 464 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ERFP50548 548 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 NCKAP1LP55160 1127 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 PURAQ00577 322 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 CDH18Q13634 790 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 SPARCL1Q14515 664 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 CASP8Q14790 479 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 COBLL1Q53SF7 1204 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ZC3H12AQ5D1E8 599 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 RNF10Q8N5U6 811 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 CDC26Q8NHZ8 85 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 HDAC7Q8WUI4 952 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 TMEM40Q8WWA1 233 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ING5Q8WYH8 240 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 NR2E3Q9Y5X4 410 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 MYBPHLA2RUH7 354 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 GRID2IPA4D2P6 1211 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ARL5CA6NH57 179 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 GOLGA8KD6RF30 607 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 GOLGA8TH3BQL2 631 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 GIPC1O14908 333 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 IVLP07476 585 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 TMEM253P0C7T8 217 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 HARS2P49590 506 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 NSUN2Q08J23 767 aaKnown RBP eCLIP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 MMRN1Q13201 1228 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 THOC5Q13769 683 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 KYNUQ16719 465 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 FAM47EQ6ZV65 393 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 NAT16Q8N8M0 369 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 PAAF1Q9BRP4 392 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 VPS11Q9H270 941 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 PFDN4Q9NQP4 134 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ASCC3Q8N3C0 2202 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 SH3BP5O60239 455 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 CNMDO75829 334 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ZSCAN5DPP0CG00 497 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 AFF1P51825 1210 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 BCAT1P54687 386 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 TARBP2Q15633 366 aaKnown RBP9.42□□□□□ -0.9
SBNO1-203ENST00000602398 CFAP52Q8N1V2 620 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 B3GALNT2Q8NCR0 500 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 EDEM3Q9BZQ6 932 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 ITGA11Q9UKX5 1188 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 USP18Q9UMW8 372 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 SLC4A7Q9Y6M7 1214 aa9.42□□□□□ -0.9
SBNO1-203ENST00000602398 FAM237AA0A1B0GTK4 181 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 CCDC195A0A1B0GUA6 201 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 C9IYK1 514 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 SPAG7O75391 227 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 JCHAINP01591 159 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 PYGMP11217 842 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 SELPP16109 830 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 TPH1P17752 444 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 MSH2P43246 934 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 GJA9P57773 515 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 GNGT1P63211 74 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 EML3Q32P44 896 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 CES3Q6UWW8 571 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 TAS2R42Q7RTR8 314 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 MCOLN2Q8IZK6 566 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 TMEM199Q8N511 208 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 LNX1Q8TBB1 728 aaPredicted RBP9.41□□□□□ -0.9
SBNO1-203ENST00000602398 MRPS31Q92665 395 aaKnown RBP9.41□□□□□ -0.9
SBNO1-203ENST00000602398 SPATA17Q96L03 361 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 SLC28A3Q9HAS3 691 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 MRFAP1Q9Y605 127 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 ZDBF2Q9HCK1 2354 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 NUP188Q5SRE5 1749 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 H3BRJ5 948 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 AMHP03971 560 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 ICAM3P32942 547 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 ATXN1P54253 815 aaKnown RBP9.41□□□□□ -0.9
SBNO1-203ENST00000602398 FAM228AQ86W67 206 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 SPATA20Q8TB22 786 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 RAPGEF5Q92565 580 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 KLC2Q9H0B6 622 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 APOBEC3GQ9HC16 384 aaKnown RBP9.41□□□□□ -0.9
SBNO1-203ENST00000602398 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 PLAAQ9Y263 795 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 SMIM35A0A1B0GVV1 85 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 TULP2O00295 520 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 P4HA2O15460 535 aa9.41□□□□□ -0.9
SBNO1-203ENST00000602398 CXCL14O95715 111 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms