RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 ZNF252P-AS1Q0IIN9 211 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 LPCAT4Q643R3 524 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 SAMD7Q7Z3H4 446 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 SCUBE1Q8IWY4 988 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 ABRAQ8N0Z2 381 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 MTMR14Q8NCE2 650 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 SMC1BQ8NDV3 1235 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 CLEC4DQ8WXI8 215 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 GATA6Q92908 595 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 TRIM11Q96F44 468 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 EBF3Q9H4W6 596 aa19.18■□□□□ 0.66
UPF1-210ENST00000600689 MTO1Q9Y2Z2 717 aaKnown RBP19.18■□□□□ 0.66
UPF1-210ENST00000600689 DHX15O43143 795 aaKnown RBP19.17■□□□□ 0.66
UPF1-210ENST00000600689 RARBP10826 455 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 GTF2H1P32780 548 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 CCNFP41002 786 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 CIAPIN1Q6FI81 312 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 RAPH1Q70E73 1250 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 C12orf56Q8IXR9 622 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 EMC1Q8N766 993 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 DCAKDQ8WVC6 231 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 TJP2Q9UDY2 1190 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 KBTBD13C9JR72 458 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 F5H423 210 aaPredicted RBP19.17■□□□□ 0.66
UPF1-210ENST00000600689 PDE5AO76074 875 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 SPATA31D3P0C874 917 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 LIG4P49917 911 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 AQP5P55064 265 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 SLC25A3Q00325 362 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 ORC1Q13415 861 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 PEX6Q13608 980 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 CNPY1Q3B7I2 92 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 TKFCQ3LXA3 575 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 SPATA31D4Q6ZUB0 917 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.17■□□□□ 0.66
UPF1-210ENST00000600689 TEPSINQ96N21 525 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 RIT2Q99578 217 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 PARVAQ9NVD7 372 aa19.17■□□□□ 0.66
UPF1-210ENST00000600689 ANKRD33BA6NCL7 494 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 TRIM49D1C9J1S8 452 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 GCNT1Q02742 428 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 PRAMEF18Q5VWM3 479 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 B3GNT9Q6UX72 402 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 PDIK1LQ8N165 341 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 CCDC33Q8N5R6 958 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 HSPH1Q92598 858 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 MTBPQ96DY7 904 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 WNK4Q96J92 1243 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 CALN1Q9BXU9 219 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 IP6K2Q9UHH9 426 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 hCG_1818297A0A087WSY0 165 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 A6NJR5 290 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 PRR5-ARHGAP8B1AHC4 643 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 COPEO14579 308 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 RNASEH1O60930 286 aaKnown RBP19.16■□□□□ 0.66
UPF1-210ENST00000600689 HSD17B4P51659 736 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 ARHGAP8P85298 464 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 DSG1Q02413 1049 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 TAF5Q15542 800 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 CHI3L2Q15782 390 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 C6orf163Q5TEZ5 329 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 ADGRD1Q6QNK2 874 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 CEP128Q6ZU80 1094 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 DPH6Q7L8W6 267 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 NMD3Q96D46 503 aaKnown RBP19.16■□□□□ 0.66
UPF1-210ENST00000600689 IFT43Q96FT9 208 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 IWS1Q96ST2 819 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 ARHGEF4Q9NR80 690 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 CCDC160A6NGH7 325 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 PIK3R2O00459 728 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 ABLIM1O14639 778 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 UGT1A9O60656 530 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 PLA2G6O60733 806 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 MRPS9P82933 396 aaKnown RBP19.16■□□□□ 0.66
UPF1-210ENST00000600689 BST1Q10588 318 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 OASLQ15646 514 aaKnown RBP19.16■□□□□ 0.66
UPF1-210ENST00000600689 TFDP3Q5H9I0 405 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 NPNTQ6UXI9 565 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 MAP4K3Q8IVH8 894 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 SLC26A7Q8TE54 656 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 MMP19Q99542 508 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 EBF4Q9BQW3 602 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 ASCC2Q9H1I8 757 aaPredicted RBP19.16■□□□□ 0.66
UPF1-210ENST00000600689 VPS11Q9H270 941 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 UGT1A7Q9HAW7 530 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 UGT1A10Q9HAW8 530 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 UGT1A8Q9HAW9 530 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 SLC7A8Q9UHI5 535 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 ANGPTL2Q9UKU9 493 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 NUB1Q9Y5A7 615 aa19.16■□□□□ 0.66
UPF1-210ENST00000600689 E2F8A0AVK6 867 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 I3L4J1 428 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 CCNE2O96020 404 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 NCKAP1LP55160 1127 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 CUL2Q13617 745 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 ANO5Q75V66 913 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 ARHGAP22Q7Z5H3 698 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 USP37Q86T82 979 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 RASSF3Q86WH2 238 aa19.15■□□□□ 0.66
UPF1-210ENST00000600689 ULK2Q8IYT8 1036 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms