RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 CCDC110Q8TBZ0 833 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 OXNAD1Q96HP4 312 aaPredicted RBP13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 PDCD2LQ9BRP1 358 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 OSBPL8Q9BZF1 889 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 RNF146Q9NTX7 359 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 APPL1Q9UKG1 709 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 OATP04181 439 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 ARSEP51690 589 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 AP2B1P63010 937 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 GTF2BQ00403 316 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 GK3PQ14409 553 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 ACAD10Q6JQN1 1059 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 IYDQ6PHW0 289 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 SDCCAG8Q86SQ7 713 aaPredicted RBP13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 SESTD1Q86VW0 696 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 ARL10Q8N8L6 244 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 OR6Y1Q8NGX8 325 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 SHC3Q92529 594 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 RILPQ96NA2 401 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 STRA6Q9BX79 667 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 KLHL4Q9C0H6 718 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 DNPEPQ9ULA0 475 aa13.38□□□□□ -0.27
PPFIA4-210ENST00000599966 DNAJC6O75061 913 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 PCSK6P29122 969 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 ATXN3P54252 364 aaPredicted RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 ADARP55265 1226 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 FSTL1Q12841 308 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 TRIP10Q15642 601 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 RALGPS1Q5JS13 557 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 PRPF39Q86UA1 669 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 TARS2Q9BW92 718 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 POLR3FQ9H1D9 316 aaPredicted RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 PTPRJQ12913 1337 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 PIK3R2O00459 728 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 SERPINB6P35237 376 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 RPL7AP62424 266 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 HPCAP84074 193 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 GSTA3Q16772 222 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 B3GNT9Q6UX72 402 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 ARID3BQ8IVW6 561 aaPredicted RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 PPP2R3CQ969Q6 453 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 ADAMTS6Q9UKP5 1117 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 SMG5Q9UPR3 1016 aaKnown RBP13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 TAF1LQ8IZX4 1826 aa13.37□□□□□ -0.27
PPFIA4-210ENST00000599966 SLC26A4O43511 780 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 TCEA3O75764 348 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 HLA-DRAP01903 254 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 NR3C2P08235 984 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 DSG3P32926 999 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 PTGER2P43116 358 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 NRLP54845 237 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 HMGCS2P54868 508 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 PDE1BQ01064 536 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 PLOD1Q02809 727 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 MSLNQ13421 630 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 WDR44Q5JSH3 913 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 C6orf163Q5TEZ5 329 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 TRIM67Q6ZTA4 783 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 CCDC60Q8IWA6 550 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 NME8Q8N427 588 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 C12orf50Q8NA57 414 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 NCSTNQ92542 709 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 SUDS3Q9H7L9 328 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 GTF3C4Q9UKN8 822 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 ACTL7BQ9Y614 415 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 SPATA31A6Q5VVP1 1343 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 ONECUT3O60422 494 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 TRPA1O75762 1119 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 CXCL9Q07325 125 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 CBX3Q13185 183 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 SMTNL2Q2TAL5 461 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 KCTD21Q4G0X4 260 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 NBPF12Q5TAG4 269 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 CCDC89Q8N998 374 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 SKA1Q96BD8 255 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 TMEM8AQ9HCN3 771 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 GINM1Q9NU53 330 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 UBIAD1Q9Y5Z9 338 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 CAPN8A6NHC0 703 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 PRR5-ARHGAP8B1AHC4 643 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 POTEJP0CG39 1038 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 FDX1P10109 184 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 VCLP18206 1134 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 HSD17B4P51659 736 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 ARHGAP8P85298 464 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 TCHHL1Q5QJ38 904 aaPredicted RBP13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 FBXL19Q6PCT2 694 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 GRK7Q8WTQ7 553 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms