RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 C1QTNF9BB2RNN3 333 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 ABL1P00519 1130 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 CYP17A1P05093 508 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 C1QTNF9P0C862 333 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 MAGEA11P43364 429 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 SHC2P98077 582 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 IFRD2Q12894 506 aaPredicted RBP20.54■□□□□ 0.88
IRF3-222ENST00000599144 FOXC1Q12948 553 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 RESTQ13127 1097 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 NR1H3Q13133 447 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 MDH1BQ5I0G3 518 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 EMC10Q5UCC4 262 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 PMS2CLQ68D20 193 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 TMEM92Q6UXU6 159 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 ARMCX6Q7L4S7 300 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 C12orf40Q86WS4 652 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 PDILTQ8N807 584 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 FSIP1Q8NA03 581 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 FUBP3Q96I24 572 aaKnown RBP eCLIP20.54■□□□□ 0.88
IRF3-222ENST00000599144 ANKRD36BP1Q96IX9 119 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 OLFML3Q9NRN5 406 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 TCHHQ07283 1943 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 GREB1Q4ZG55 1949 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 OBSL1O75147 1896 aa20.54■□□□□ 0.88
IRF3-222ENST00000599144 FRMD3A2A2Y4 597 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 NFATC1O95644 943 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 STAT6P42226 847 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 DHPSP49366 369 aaPredicted RBP20.53■□□□□ 0.88
IRF3-222ENST00000599144 SH3PXD2AQ5TCZ1 1133 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 C4orf50Q6ZRC1 276 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 DENND5BQ6ZUT9 1274 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 LIMS2Q7Z4I7 341 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 ALLCQ8N6M5 410 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 EXOC4Q96A65 974 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 PCED1BQ96HM7 432 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 MMS19Q96T76 1030 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 DPEP3Q9H4B8 488 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 TMEM30AQ9NV96 361 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 TRPM5Q9NZQ8 1165 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 CDH9Q9ULB4 789 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 CPQQ9Y646 472 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 USP24Q9UPU5 2620 aa20.53■□□□□ 0.88
IRF3-222ENST00000599144 EML5Q05BV3 1969 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 F8VP50 259 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 TNNC2P02585 160 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 HOXD13P35453 343 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 TXLNAP40222 546 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 KDSRQ06136 332 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 ZNF252P-AS1Q0IIN9 211 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 MYO1EQ12965 1108 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 USP39Q53GS9 565 aaKnown RBP20.52■□□□□ 0.88
IRF3-222ENST00000599144 CYP2U1Q7Z449 544 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 RASSF3Q86WH2 238 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 RDH13Q8NBN7 331 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 PIGKQ92643 395 aa20.52■□□□□ 0.88
IRF3-222ENST00000599144 R3HCC1Q9Y3T6 440 aaKnown RBP20.52■□□□□ 0.88
IRF3-222ENST00000599144 ZNF840PA6NDX5 716 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 SGK1O00141 431 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 CLDN5O00501 218 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 KLF8O95600 359 aaPredicted RBP20.51■□□□□ 0.87
IRF3-222ENST00000599144 CST3P01034 146 aaPredicted RBP20.51■□□□□ 0.87
IRF3-222ENST00000599144 WARSP23381 471 aaKnown RBP20.51■□□□□ 0.87
IRF3-222ENST00000599144 ANXA13P27216 316 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 TIE1P35590 1138 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 IRX4P78413 519 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 DHCR24Q15392 516 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 CRY1Q16526 586 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 UAP1L1Q3KQV9 507 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 HS2ST1Q7LGA3 356 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 TXNDC5Q8NBS9 432 aaKnown RBP20.51■□□□□ 0.87
IRF3-222ENST00000599144 SPATA17Q96L03 361 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 CNOT6LQ96LI5 555 aaKnown RBP20.51■□□□□ 0.87
IRF3-222ENST00000599144 USP28Q96RU2 1077 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 ZNF518BQ9C0D4 1074 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 CFAP97Q9P2B7 532 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 MMP17Q9ULZ9 603 aa20.51■□□□□ 0.87
IRF3-222ENST00000599144 ATXN2Q99700 1313 aaKnown RBP20.51■□□□□ 0.87
IRF3-222ENST00000599144 CDX4O14627 284 aaPredicted RBP20.5■□□□□ 0.87
IRF3-222ENST00000599144 KHNYNO15037 678 aaKnown RBP20.5■□□□□ 0.87
IRF3-222ENST00000599144 CHRM1P11229 460 aaPredicted RBP20.5■□□□□ 0.87
IRF3-222ENST00000599144 TCF3P15923 654 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 TAF10Q12962 218 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 VSTM1Q6UX27 236 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 MYCBPAPQ8TBZ2 947 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 SPATA18Q8TC71 538 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 ELMO3Q96BJ8 720 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 FSCN3Q9NQT6 498 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 HSPBP1Q9NZL4 362 aa20.5■□□□□ 0.87
IRF3-222ENST00000599144 CNOT1A5YKK6 2376 aaKnown RBP20.5■□□□□ 0.87
IRF3-222ENST00000599144 DENND4CQ5VZ89 1909 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 ZNF233A6NK53 670 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 DLATP10515 647 aaKnown RBP20.49■□□□□ 0.87
IRF3-222ENST00000599144 ALCAMQ13740 583 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 DUOXA2Q1HG44 320 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 DAB2IPQ5VWQ8 1189 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 KIAA1211LQ6NV74 962 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 RHBDF2Q6PJF5 856 aa20.49■□□□□ 0.87
IRF3-222ENST00000599144 DPH6Q7L8W6 267 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms