RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 FAM186AA6NE01 2351 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 F8VP50 259 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 HDCP19113 662 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 AMPD2Q01433 879 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 ENPEPQ07075 957 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 ADAM9Q13443 819 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 PDGFRLQ15198 375 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 TXNDC11Q6PKC3 985 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 INTS8Q75QN2 995 aaKnown RBP24.5■■□□□ 1.51
SSBP4-205ENST00000598159 SYNPOQ8N3V7 929 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 SPEM1Q8N4L4 309 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 ARL14EPQ8N8R7 260 aaPredicted RBP24.5■■□□□ 1.51
SSBP4-205ENST00000598159 ZBTB44Q8NCP5 570 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 SMYD3Q9H7B4 428 aa24.5■■□□□ 1.51
SSBP4-205ENST00000598159 CKMP06732 381 aa24.49■■□□□ 1.51
SSBP4-205ENST00000598159 PSMC2P35998 433 aaKnown RBP24.49■■□□□ 1.51
SSBP4-205ENST00000598159 CXCL12P48061 93 aa24.49■■□□□ 1.51
SSBP4-205ENST00000598159 PON2Q15165 354 aa24.49■■□□□ 1.51
SSBP4-205ENST00000598159 FMR1NBQ8N0W7 255 aaPredicted RBP24.49■■□□□ 1.51
SSBP4-205ENST00000598159 SLC22A12Q96S37 553 aa24.49■■□□□ 1.51
SSBP4-205ENST00000598159 EBF3Q9H4W6 596 aa24.49■■□□□ 1.51
SSBP4-205ENST00000598159 HPS4Q9NQG7 708 aa24.49■■□□□ 1.51
SSBP4-205ENST00000598159 KIF26AQ9ULI4 1882 aaPredicted RBP24.49■■□□□ 1.51
SSBP4-205ENST00000598159 C2orf78A6NCI8 922 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 ATP8B3O60423 1300 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 AKAP3O75969 853 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 KRT13P13646 458 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 TCF3P15923 654 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 USP46P62068 366 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 MTF1Q14872 753 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 C1orf220Q5T0J3 134 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 TSSK4Q6SA08 328 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 ZNF518BQ9C0D4 1074 aa24.48■■□□□ 1.51
SSBP4-205ENST00000598159 VPS13AQ96RL7 3174 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 CLDN5O00501 218 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 LILRB5O75023 590 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 ASS1P00966 412 aaKnown RBP24.47■■□□□ 1.51
SSBP4-205ENST00000598159 RAP1GAPP47736 663 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 GAS6Q14393 721 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 ZNF77Q15935 545 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 EDRF1Q3B7T1 1238 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 TRIM68Q6AZZ1 485 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 UNC93AQ86WB7 457 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 FAM186BQ8IYM0 893 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 NUP93Q8N1F7 819 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 OSCP1Q8WVF1 389 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 SDCBP2Q9H190 292 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 RBM12Q9NTZ6 932 aaKnown RBP24.47■■□□□ 1.51
SSBP4-205ENST00000598159 RMND1Q9NWS8 449 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 ARHGAP26Q9UNA1 814 aa24.47■■□□□ 1.51
SSBP4-205ENST00000598159 ZNF840PA6NDX5 716 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 TRDMT1O14717 391 aaKnown RBP24.46■■□□□ 1.51
SSBP4-205ENST00000598159 RTN3O95197 1032 aaPredicted RBP24.46■■□□□ 1.51
SSBP4-205ENST00000598159 HLA-DRAP01903 254 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 CACNA2D1P54289 1103 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 MCCD1P59942 119 aaPredicted RBP24.46■■□□□ 1.51
SSBP4-205ENST00000598159 CCINQ13939 588 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 WDR44Q5JSH3 913 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 SCARA5Q6ZMJ2 495 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 CRYBG2Q8N1P7 616 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 SUMF1Q8NBK3 374 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 RIN3Q8TB24 985 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 EXOC4Q96A65 974 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 ELMO3Q96BJ8 720 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 SLITRK1Q96PX8 696 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 GSDMAQ96QA5 445 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 MED10Q9BTT4 135 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 IMPG2Q9BZV3 1241 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 TMEM30AQ9NV96 361 aa24.46■■□□□ 1.51
SSBP4-205ENST00000598159 DUS2Q9NX74 493 aaKnown RBP24.46■■□□□ 1.51
SSBP4-205ENST00000598159 OTOL1A6NHN0 477 aaPredicted RBP24.45■■□□□ 1.5
SSBP4-205ENST00000598159 TDGF1P13385 188 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 ARSAP15289 507 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 TRIM21P19474 475 aaKnown RBP24.45■■□□□ 1.5
SSBP4-205ENST00000598159 YWHAQP27348 245 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 PIK3CAP42336 1068 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 GRSF1Q12849 480 aaKnown RBP eCLIP24.45■■□□□ 1.5
SSBP4-205ENST00000598159 TAF10Q12962 218 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 USP4Q13107 963 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 PNOCQ13519 176 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 ZCWPW2Q504Y3 356 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 PAQR9Q6ZVX9 377 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 ACOT1Q86TX2 421 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 ENGASEQ8NFI3 743 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 SH3RF2Q8TEC5 729 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 COMMD8Q9NX08 183 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 DMDP11532 3685 aa24.45■■□□□ 1.5
SSBP4-205ENST00000598159 PAPSS2O95340 614 aaPredicted RBP24.44■■□□□ 1.5
SSBP4-205ENST00000598159 GTF2H1P32780 548 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 GCLMP48507 274 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 IFNAR2P48551 515 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 NDST1P52848 882 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 NR1H3Q13133 447 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 TMEM196Q5HYL7 178 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 FAM35AQ86V20 835 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 CPA6Q8N4T0 437 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 KIAA1958Q8N8K9 716 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 OVCA2Q8WZ82 227 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 RUBCNQ92622 972 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 ATP2A3Q93084 1043 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms