RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CRYBG2Q8N1P7 616 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 TNIP3Q96KP6 325 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 KCNK16Q96T55 309 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 ELOVL4Q9GZR5 314 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 EBF3Q9H4W6 596 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 HPS4Q9NQG7 708 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 TMEM30AQ9NV96 361 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 RMND1Q9NWS8 449 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 TCHHQ07283 1943 aa16.04■□□□□ 0.16
LIG1-215ENST00000597901 ZNF840PA6NDX5 716 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 OTOL1A6NHN0 477 aaPredicted RBP16.03■□□□□ 0.16
LIG1-215ENST00000597901 CKMP06732 381 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 PRCPP42785 496 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 PPP3CCP48454 512 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 TAF10Q12962 218 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 LRRC32Q14392 662 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 GAS6Q14393 721 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 PON2Q15165 354 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 WDR44Q5JSH3 913 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 DGKKQ5KSL6 1271 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 SCARA5Q6ZMJ2 495 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 ACOT1Q86TX2 421 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 NUP93Q8N1F7 819 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 ATRIPQ8WXE1 791 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 NELL1Q92832 810 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 TIGD1Q96MW7 591 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 GSDMAQ96QA5 445 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 IER2Q9BTL4 223 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 MED10Q9BTT4 135 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 RBM12Q9NTZ6 932 aaKnown RBP16.03■□□□□ 0.16
LIG1-215ENST00000597901 ZSCAN32Q9NX65 697 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 PCDHA5Q9Y5H7 936 aa16.03■□□□□ 0.16
LIG1-215ENST00000597901 SMC2O95347 1197 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 TRIM49P0CI25 452 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 TRIM49CP0CI26 452 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 ARSAP15289 507 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 PFKLP17858 780 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 CXCL12P48061 93 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 NDST1P52848 882 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 MTF1Q14872 753 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 PDGFRLQ15198 375 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 EDRF1Q3B7T1 1238 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 ZNF658Q5TYW1 1059 aaPredicted RBP16.02■□□□□ 0.16
LIG1-215ENST00000597901 UNC93AQ86WB7 457 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 ZBTB44Q8NCP5 570 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 TAS1R2Q8TE23 839 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 SH3RF2Q8TEC5 729 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 EEF2KMTQ96G04 330 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 HINFPQ9BQA5 517 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 RNF38Q9H0F5 515 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 LINC00597Q9H2U6 94 aa16.02■□□□□ 0.16
LIG1-215ENST00000597901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.02■□□□□ 0.168e-9■■■■■ 40.9
LIG1-215ENST00000597901 PRMT8Q9NR22 394 aaPredicted RBP16.02■□□□□ 0.16
LIG1-215ENST00000597901 DUS2Q9NX74 493 aaKnown RBP16.02■□□□□ 0.16
LIG1-215ENST00000597901 CHORDC1Q9UHD1 332 aaPredicted RBP16.02■□□□□ 0.16
LIG1-215ENST00000597901 CETN3O15182 167 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 ABL1P00519 1130 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 YWHAQP27348 245 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 PIK3CAP42336 1068 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 ASPAP45381 313 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 PDE6CP51160 858 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 CCR3P51677 355 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 ZXDBP98169 803 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 ORC1Q13415 861 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 ZNF77Q15935 545 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 FUKQ8N0W3 1084 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 SYNPOQ8N3V7 929 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 SPEM1Q8N4L4 309 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 TTC16Q8NEE8 873 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 SPATA20Q8TB22 786 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 OSCP1Q8WVF1 389 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 ERCC4Q92889 916 aaPredicted RBP16.01■□□□□ 0.15
LIG1-215ENST00000597901 MMRN2Q9H8L6 949 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 APOBEC3GQ9HC16 384 aaKnown RBP16.01■□□□□ 0.15
LIG1-215ENST00000597901 ARHGAP26Q9UNA1 814 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 PCDHGA2Q9Y5H1 932 aa16.01■□□□□ 0.15
LIG1-215ENST00000597901 ATP8B3O60423 1300 aa16■□□□□ 0.15
LIG1-215ENST00000597901 TRDMT1O14717 391 aaKnown RBP16■□□□□ 0.15
LIG1-215ENST00000597901 TNFRSF10BO14763 440 aa16■□□□□ 0.15
LIG1-215ENST00000597901 KINO60870 393 aaKnown RBP16■□□□□ 0.15
LIG1-215ENST00000597901 RTN3O95197 1032 aaPredicted RBP16■□□□□ 0.15
LIG1-215ENST00000597901 TDGF1P13385 188 aa16■□□□□ 0.15
LIG1-215ENST00000597901 TCF3P15923 654 aa16■□□□□ 0.15
LIG1-215ENST00000597901 GTF2H1P32780 548 aa16■□□□□ 0.15
LIG1-215ENST00000597901 GALK1P51570 392 aa16■□□□□ 0.15
LIG1-215ENST00000597901 AMPD2Q01433 879 aa16■□□□□ 0.15
LIG1-215ENST00000597901 SATB1Q01826 763 aa16■□□□□ 0.15
LIG1-215ENST00000597901 IFRD2Q12894 506 aaPredicted RBP16■□□□□ 0.15
LIG1-215ENST00000597901 CCINQ13939 588 aa16■□□□□ 0.15
LIG1-215ENST00000597901 PPP2R5DQ14738 602 aa16■□□□□ 0.15
LIG1-215ENST00000597901 COBLL1Q53SF7 1204 aa16■□□□□ 0.15
LIG1-215ENST00000597901 KRT39Q6A163 491 aa16■□□□□ 0.15
LIG1-215ENST00000597901 ANKRD40Q6AI12 368 aa16■□□□□ 0.15
LIG1-215ENST00000597901 FAM35AQ86V20 835 aa16■□□□□ 0.15
LIG1-215ENST00000597901 C12orf29Q8N999 325 aa16■□□□□ 0.15
LIG1-215ENST00000597901 SUMF1Q8NBK3 374 aa16■□□□□ 0.15
LIG1-215ENST00000597901 SCAMP5Q8TAC9 235 aa16■□□□□ 0.15
LIG1-215ENST00000597901 SMARCE1Q969G3 411 aa16■□□□□ 0.15
LIG1-215ENST00000597901 CHFRQ96EP1 664 aa16■□□□□ 0.15
LIG1-215ENST00000597901 SLITRK1Q96PX8 696 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms