RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 ZFHX2Q9C0A1 2572 aaPredicted RBP17.05■□□□□ 0.32
IRF3-210ENST00000595240 USP34Q70CQ2 3546 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 VPS13AQ96RL7 3174 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 C2orf78A6NCI8 922 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 SPECC1L-ADORA2AF8WAN1 911 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 CETN3O15182 167 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 USP17L7P0C7H9 530 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 NDST1P52848 882 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 ITPRIPL2Q3MIP1 535 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 TXNDC11Q6PKC3 985 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 PAQR9Q6ZVX9 377 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 ASCL5Q7RTU5 278 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 ACOT1Q86TX2 421 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 FAM35AQ86V20 835 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 UNC93AQ86WB7 457 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 ZC3H3Q8IXZ2 948 aaKnown RBP17.04■□□□□ 0.32
IRF3-210ENST00000595240 ADSSL1Q8N142 457 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 CRYBG2Q8N1P7 616 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 CYP2S1Q96SQ9 504 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 CHRDQ9H2X0 955 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 APOBEC3GQ9HC16 384 aaKnown RBP17.04■□□□□ 0.32
IRF3-210ENST00000595240 HMGXB4Q9UGU5 601 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 FBXO4Q9UKT5 387 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 TICRRQ7Z2Z1 1910 aa17.04■□□□□ 0.32
IRF3-210ENST00000595240 ATP8B3O60423 1300 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 ZNF840PA6NDX5 716 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 PRR23AA6NEV1 266 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 LAMTOR5O43504 91 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 CKMP06732 381 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 EPB41P11171 864 aaKnown RBP17.03■□□□□ 0.32
IRF3-210ENST00000595240 CHRNB1P11230 501 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 PFKLP17858 780 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 PPP3CCP48454 512 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 PMS1P54277 932 aaKnown RBP17.03■□□□□ 0.32
IRF3-210ENST00000595240 INCA1Q0VD86 236 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 MTAPQ13126 283 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 ZNF528Q3MIS6 628 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 ANKRD40Q6AI12 368 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 MAMSTRQ6ZN01 415 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 FUKQ8N0W3 1084 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 ARL14EPQ8N8R7 260 aaPredicted RBP17.03■□□□□ 0.32
IRF3-210ENST00000595240 TTC8Q8TAM2 541 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 NKD2Q969F2 451 aaPredicted RBP17.03■□□□□ 0.32
IRF3-210ENST00000595240 IER2Q9BTL4 223 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 IMPG2Q9BZV3 1241 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 NIF3L1Q9GZT8 377 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 LMAN1LQ9HAT1 526 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 CYP3A43Q9HB55 503 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 HPS4Q9NQG7 708 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.03■□□□□ 0.321e-10■■■■■ 74.5
IRF3-210ENST00000595240 TRPM5Q9NZQ8 1165 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 PTPRDP23468 1912 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 MIA3Q5JRA6 1907 aa17.03■□□□□ 0.32
IRF3-210ENST00000595240 CACNA1IQ9P0X4 2223 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 KINO60870 393 aaKnown RBP17.02■□□□□ 0.32
IRF3-210ENST00000595240 TCF3P15923 654 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 HDCP19113 662 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 PDE6CP51160 858 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 FKBP3Q00688 224 aaKnown RBP17.02■□□□□ 0.32
IRF3-210ENST00000595240 LRRC63Q05C16 580 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 TAF10Q12962 218 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 USP4Q13107 963 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 ORC1Q13415 861 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 ZNF77Q15935 545 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 WDR44Q5JSH3 913 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 KRT39Q6A163 491 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 TRIM68Q6AZZ1 485 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 NUP93Q8N1F7 819 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 SMARCD1Q96GM5 515 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 KCNK16Q96T55 309 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 TSG101Q99816 390 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 MED10Q9BTT4 135 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 EBF3Q9H4W6 596 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 MMRN2Q9H8L6 949 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 DMAP1Q9NPF5 467 aaPredicted RBP17.02■□□□□ 0.32
IRF3-210ENST00000595240 PRMT8Q9NR22 394 aaPredicted RBP17.02■□□□□ 0.32
IRF3-210ENST00000595240 ARHGAP26Q9UNA1 814 aa17.02■□□□□ 0.32
IRF3-210ENST00000595240 DENND4CQ5VZ89 1909 aa17.02■□□□□ 0.31
IRF3-210ENST00000595240 OBSL1O75147 1896 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 DMDP11532 3685 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 OTOL1A6NHN0 477 aaPredicted RBP17.01■□□□□ 0.31
IRF3-210ENST00000595240 TNFRSF10BO14763 440 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 SLC16A3O15427 465 aaKnown RBP17.01■□□□□ 0.31
IRF3-210ENST00000595240 STX10O60499 249 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 GADD45BO75293 160 aaPredicted RBP17.01■□□□□ 0.31
IRF3-210ENST00000595240 RTN3O95197 1032 aaPredicted RBP17.01■□□□□ 0.31
IRF3-210ENST00000595240 OLFM2O95897 454 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 CCDC130P13994 396 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 MXI1P50539 228 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 RUNX3Q13761 415 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 MTF1Q14872 753 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 PDGFRLQ15198 375 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 CC2D1AQ6P1N0 951 aaPredicted RBP17.01■□□□□ 0.31
IRF3-210ENST00000595240 SLC2A14Q8TDB8 520 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 SH3RF2Q8TEC5 729 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 SEMA4DQ92854 862 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 SLITRK1Q96PX8 696 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 TWNKQ96RR1 684 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 SEMA4AQ9H3S1 761 aa17.01■□□□□ 0.31
IRF3-210ENST00000595240 KRT82Q9NSB4 513 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms