RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 ZC3H18Q86VM9 953 aaKnown RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 SESTD1Q86VW0 696 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 SCUBE1Q8IWY4 988 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 DHX37Q8IY37 1157 aaKnown RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 THNSL1Q8IYQ7 743 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 CMTR2Q8IYT2 770 aaKnown RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 LILRB2Q8N423 598 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 C12orf76Q8N812 135 aaPredicted RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 TXNDC5Q8NBS9 432 aaKnown RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 MDM1Q8TC05 714 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 DNAAF4Q8WXU2 420 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 ZNF669Q96BR6 464 aaPredicted RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 CTAGE1Q96RT6 745 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 SRPK1Q96SB4 655 aaKnown RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 TCF25Q9BQ70 676 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 NGRNQ9NPE2 291 aaKnown RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 JADE2Q9NQC1 790 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 FBXO28Q9NVF7 368 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 C9orf78Q9NZ63 289 aaPredicted RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 RAI14Q9P0K7 980 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 PPP4R1LQ9P1A2 415 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 CROTQ9UKG9 612 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 RIPK3Q9Y572 518 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 PCDHA9Q9Y5H5 950 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 MGAQ8IWI9 3026 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 ASCC3Q8N3C0 2202 aaKnown RBP3.92□□□□□ -1.78
DNMT1-226ENST00000592054 CACNA1DQ01668 2161 aa3.92□□□□□ -1.78
DNMT1-226ENST00000592054 LOXHD1Q8IVV2 1947 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 HIDE1A8MVS5 230 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 ACOT7O00154 380 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 ZBED4O75132 1171 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 FGF18O76093 207 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 AMY2AP04746 511 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 PYGMP11217 842 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 AMY2BP19961 511 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 RPS9P46781 194 aaKnown RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 CCR3P51677 355 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 SIM1P81133 766 aaPredicted RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 MTAPQ13126 283 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 FHL2Q14192 279 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 BMS1Q14692 1282 aaKnown RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 PPP2R5BQ15173 497 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 TAF1BQ53T94 588 aaPredicted RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 KIAA1755Q5JYT7 1200 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 FSTL4Q6MZW2 842 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 ATG9AQ7Z3C6 839 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 CIR1Q86X95 450 aaPredicted RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 CHCHD4Q8N4Q1 142 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 DEFB124Q8NES8 71 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 PCDH19Q8TAB3 1148 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 UHMK1Q8TAS1 419 aaKnown RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 SLC7A14Q8TBB6 771 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 STAMQ92783 540 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 ZNF689Q96CS4 500 aaPredicted RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 LCORQ96JN0 433 aaPredicted RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 MYADMQ96S97 322 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 NELL2Q99435 816 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 ALG1Q9BT22 464 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 DHRS4Q9BTZ2 278 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 KATNAL1Q9BW62 490 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 VCPKMTQ9H867 229 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 SLC2A4RGQ9NR83 387 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 VPS45Q9NRW7 570 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 HOMER2Q9NSB8 354 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 AATFQ9NY61 560 aaKnown RBP eCLIP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 HDAC6Q9UBN7 1215 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 IL17BQ9UHF5 180 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 CBLCQ9ULV8 474 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 MRPS23Q9Y3D9 190 aaKnown RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 MTF2Q9Y483 593 aaPredicted RBP3.91□□□□□ -1.78
DNMT1-226ENST00000592054 TCAF1Q9Y4C2 921 aa3.91□□□□□ -1.78
DNMT1-226ENST00000592054 KAT6AQ92794 2004 aa3.9□□□□□ -1.78
DNMT1-226ENST00000592054 ABCA2Q9BZC7 2435 aa3.9□□□□□ -1.78
DNMT1-226ENST00000592054 PLXNB3Q9ULL4 1909 aa3.9□□□□□ -1.78
DNMT1-226ENST00000592054 A0A087WV48 116 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 SPAARA0A1B0GVQ0 90 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 FAM47E-STBD1D6RA91 191 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 GRM8O00222 908 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 KRIT1O00522 736 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 EPN2O95208 641 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 RASGRP1O95267 797 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 CRTAMO95727 393 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 CKMP06732 381 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 ZNF28P17035 718 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 KRT15P19012 456 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 CASTP20810 708 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 CD72P21854 359 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 GUCY1A2P33402 732 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 PHKA1P46020 1223 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 JAM2P57087 298 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 SUMO1P63165 101 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 GUCY1A3Q02108 690 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 SRSF5Q13243 272 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 MLF2Q15773 248 aaPredicted RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 ATP2B3Q16720 1220 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 TRIM71Q2Q1W2 868 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 LETM2Q2VYF4 491 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 UAP1L1Q3KQV9 507 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms