RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 PMF1Q6P1K2 205 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 FUT10Q6P4F1 479 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 UBE2Q1Q7Z7E8 422 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 FAM35AQ86V20 835 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 RABGGTAQ92696 567 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 PCED1BQ96HM7 432 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 CAPZA3Q96KX2 299 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 LBHD1Q9BQE6 289 aaPredicted RBP13.66□□□□□ -0.22
PTBP1-216ENST00000590887 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.66□□□□□ -0.229e-17■□□□□ 10.7
PTBP1-216ENST00000590887 TTPALQ9BTX7 342 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 B3GNT5Q9BYG0 378 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 CRTAC1Q9NQ79 661 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 CNGB3Q9NQW8 809 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 CACNG4Q9UBN1 327 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 MTUS1Q9ULD2 1270 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 TTC7AQ9ULT0 858 aaPredicted RBP13.66□□□□□ -0.22
PTBP1-216ENST00000590887 NME7Q9Y5B8 376 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 LTBP2Q14767 1821 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 MYBPHLA2RUH7 354 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 CCDC188H7C350 402 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 I3L4J1 428 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 PGRMC1O00264 195 aaKnown RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 TRIM66O15016 1216 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 FANCGO15287 622 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 HSF2BPO75031 334 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 RGS7P49802 495 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 DNA2P51530 1060 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 ZNF143P52747 638 aaPredicted RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 WDR5P61964 334 aaKnown RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 ZFYVE27Q5T4F4 411 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 KIAA1841Q6NSI8 718 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 CC2D1AQ6P1N0 951 aaPredicted RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 VSTM1Q6UX27 236 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 PHLDB2Q86SQ0 1253 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 PIGZQ86VD9 579 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 CEP57Q86XR8 500 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 CREG2Q8IUH2 290 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 PHOSPHO2Q8TCD6 241 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 IRGQQ8WZA9 623 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 MYLPFQ96A32 169 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 ZNF689Q96CS4 500 aaPredicted RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 TMEM169Q96HH4 297 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 RBM41Q96IZ5 413 aaKnown RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 RUNDC3BQ96NL0 473 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 YME1L1Q96TA2 773 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 CNPY3Q9BT09 278 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 ZCWPW1Q9H0M4 648 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 CSNK1G1Q9HCP0 422 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 DMAP1Q9NPF5 467 aaPredicted RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 METTL5Q9NRN9 209 aaKnown RBP13.65□□□□□ -0.22
PTBP1-216ENST00000590887 KRT82Q9NSB4 513 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 RRN3Q9NYV6 651 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 CYTH4Q9UIA0 394 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 STAP1Q9ULZ2 295 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 PCDHB5Q9Y5E4 795 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 PCDHB12Q9Y5F1 795 aa13.65□□□□□ -0.22
PTBP1-216ENST00000590887 DNAH12Q6ZR08 3092 aa13.65□□□□□ -0.23
PTBP1-216ENST00000590887 DPYSL4O14531 572 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 CTIFO43310 598 aaKnown RBP13.64□□□□□ -0.23
PTBP1-216ENST00000590887 SRGAP2O75044 1071 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 ATP2C2O75185 946 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.234e-6■■□□□ 11.4
PTBP1-216ENST00000590887 LCP1P13796 627 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 PDGFRAP16234 1089 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 TKTP29401 623 aaKnown RBP13.64□□□□□ -0.23
PTBP1-216ENST00000590887 PCK1P35558 622 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 MAP3K7CLP57077 242 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 COPS2P61201 443 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 CREMQ03060 361 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 KRT17Q04695 432 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 MRPL58Q14197 206 aaKnown RBP13.64□□□□□ -0.23
PTBP1-216ENST00000590887 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
PTBP1-216ENST00000590887 C2CD6Q53TS8 623 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 CLEC20AQ6ZU45 233 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 FAM183BPQ6ZVS7 135 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 SLC26A9Q7LBE3 791 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 ZNF572Q7Z3I7 529 aaPredicted RBP13.64□□□□□ -0.23
PTBP1-216ENST00000590887 POLNQ7Z5Q5 900 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 GPR65Q8IYL9 337 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 RCOR2Q8IZ40 523 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 SCML4Q8N228 414 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 RASGEF1CQ8N431 466 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 SPPL2BQ8TCT7 592 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 BTBD6Q96KE9 485 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 CEP295NLQ96MC4 621 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 SLC9A7Q96T83 725 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 HOMER3Q9NSC5 361 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 SPG21Q9NZD8 308 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 EHD2Q9NZN4 543 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 PACSIN2Q9UNF0 486 aaPredicted RBP13.64□□□□□ -0.23
PTBP1-216ENST00000590887 USTQ9Y2C2 406 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 INSL6Q9Y581 213 aa13.64□□□□□ -0.23
PTBP1-216ENST00000590887 RANBP2P49792 3224 aaKnown RBP13.64□□□□□ -0.23
PTBP1-216ENST00000590887 DDX3YO15523 660 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms