RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TMEM206Q9H813 350 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 TRPC7Q9HCX4 862 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 SH3GLB2Q9NR46 395 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 ARHGEF4Q9NR80 690 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 WSB2Q9NYS7 404 aaPredicted RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 MAGED2Q9UNF1 606 aaPredicted RBP6.99□□□□□ -1.29
DNMT1-222ENST00000590619 NFE2L3Q9Y4A8 694 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 PCDHGA1Q9Y5H4 931 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 SNX11Q9Y5W9 270 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 CEP192Q8TEP8 1941 aa6.99□□□□□ -1.29
DNMT1-222ENST00000590619 TRAV19A0A0A6YYK7 116 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 C2orf78A6NCI8 922 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 BTBD18B2RXH4 712 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 K7ERI5 159 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 CBX4O00257 560 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 ABLIM1O14639 778 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 SUV39H1O43463 412 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 PCDHGA12O60330 932 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 AFPP02771 609 aaKnown RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 HOXB2P14652 356 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 CD6P30203 668 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 HNF1BP35680 557 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 EIF2DP41214 584 aaKnown RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 GRK6P43250 576 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 EFNA5P52803 228 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 RCAN1P53805 252 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 NFKB2Q00653 900 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 AKAP17AQ02040 695 aaKnown RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 SEZ6Q53EL9 994 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 DCAF12L1Q5VU92 463 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 BROXQ5VW32 411 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 KIAA1614Q5VZ46 1190 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 FBXL19Q6PCT2 694 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 ATG14Q6ZNE5 492 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 APBB1IPQ7Z5R6 666 aaPredicted RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 FILIP1Q7Z7B0 1213 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 ZNF248Q8NDW4 579 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 MCPH1Q8NEM0 835 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 CADM4Q8NFZ8 388 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 IPO4Q8TEX9 1081 aaKnown RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 TOE1Q96GM8 510 aaKnown RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 HIC2Q96JB3 615 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 ZBTB45Q96K62 511 aaPredicted RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 MRGPRX1Q96LB2 322 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 SENP8Q96LD8 212 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 ACOX2Q99424 681 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 LGMNQ99538 433 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 TARS2Q9BW92 718 aaKnown RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 SLC26A6Q9BXS9 759 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 NAP1L2Q9ULW6 460 aaPredicted RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 ARHGAP26Q9UNA1 814 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 SSUH2Q9Y2M2 353 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 HEMK1Q9Y5R4 338 aaPredicted RBP6.98□□□□□ -1.29
DNMT1-222ENST00000590619 SLCO1B1Q9Y6L6 691 aa6.98□□□□□ -1.29
DNMT1-222ENST00000590619 PLXND1Q9Y4D7 1925 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 KIAA1549LQ6ZVL6 1849 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 RELNP78509 3460 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 MEI4A8MW99 385 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 H0Y8X5 98 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 LEFTY2O00292 366 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 PPEF2O14830 753 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 ZBTB24O43167 697 aaPredicted RBP6.97□□□□□ -1.29
DNMT1-222ENST00000590619 CCNT1O60563 726 aaKnown RBP6.97□□□□□ -1.29
DNMT1-222ENST00000590619 CKMP06732 381 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 NFICP08651 508 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 C1SP09871 688 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 CSH1P0DML2 217 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 CSH2P0DML3 217 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 MCF2P10911 925 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 CDK4P11802 303 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 NCAM1P13591 858 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 CYP11B2P19099 503 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 POU3F2P20265 443 aaPredicted RBP6.97□□□□□ -1.29
DNMT1-222ENST00000590619 PROZP22891 400 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 NTSR1P30989 418 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 GUCY2FP51841 1108 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 UCNP55089 124 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 LILRA4P59901 499 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 ATP2C1P98194 919 aaPredicted RBP6.97□□□□□ -1.29
DNMT1-222ENST00000590619 KDSRQ06136 332 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 SMARCB1Q12824 385 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 DNAJC3Q13217 504 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 DDR2Q16832 855 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 ADCK5Q3MIX3 580 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 KCNT1Q5JUK3 1230 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 TTC22Q5TAA0 569 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 HES3Q5TGS1 186 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 HIST2H2BCQ6DN03 193 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 CACTIN-AS1Q8N1I8 211 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 NAT16Q8N8M0 369 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 ENGASEQ8NFI3 743 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 SPPL2BQ8TCT7 592 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 C2orf15Q8WU43 125 aaKnown RBP6.97□□□□□ -1.29
DNMT1-222ENST00000590619 ZFRQ96KR1 1074 aaKnown RBP6.97□□□□□ -1.29
DNMT1-222ENST00000590619 MYRFLQ96LU7 910 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 CCDC43Q96MW1 224 aaKnown RBP6.97□□□□□ -1.29
DNMT1-222ENST00000590619 TCHPQ9BT92 498 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 GPR174Q9BXC1 333 aa6.97□□□□□ -1.29
DNMT1-222ENST00000590619 RNF26Q9BY78 433 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms