RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 ZMIZ2Q8NF64 920 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 ATXN2LQ8WWM7 1075 aaKnown RBP20.26■□□□□ 0.83
DDX39A-214ENST00000590556 ZNF606Q8WXB4 792 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 WDR6Q9NNW5 1121 aaKnown RBP20.26■□□□□ 0.83
DDX39A-214ENST00000590556 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.26■□□□□ 0.83
DDX39A-214ENST00000590556 COL6A3P12111 3177 aa20.26■□□□□ 0.83
DDX39A-214ENST00000590556 MICAL2O94851 1124 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 SLC34A2O95436 690 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 RHOP08100 348 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 MYL4P12829 197 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 SSTR3P32745 418 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-214ENST00000590556 BCAT1P54687 386 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 BST2Q10589 180 aaKnown RBP20.25■□□□□ 0.83
DDX39A-214ENST00000590556 FIGNQ5HY92 759 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 TTC30AQ86WT1 665 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 LEMD2Q8NC56 503 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 UBA3Q8TBC4 463 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 IQCDQ96DY2 449 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 EDEM3Q9BZQ6 932 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 MAGED2Q9UNF1 606 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-214ENST00000590556 CLUHO75153 1309 aa20.25■□□□□ 0.83
DDX39A-214ENST00000590556 M0QYV0 167 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 CYP11B1P15538 503 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 HMGA1P17096 107 aaKnown RBP20.24■□□□□ 0.83
DDX39A-214ENST00000590556 FSHRP23945 695 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 KCNQ1P51787 676 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 EPHA5P54756 1037 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 SMAD2Q15796 467 aaKnown RBP20.24■□□□□ 0.83
DDX39A-214ENST00000590556 DENND5BQ6ZUT9 1274 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 PDZD4Q76G19 769 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-214ENST00000590556 NUP93Q8N1F7 819 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 BAP1Q92560 729 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 LRRC3Q9BY71 257 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 UBXN6Q9BZV1 441 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 TTYH3Q9C0H2 523 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 POMKQ9H5K3 350 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 ZNF334Q9HCZ1 680 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-214ENST00000590556 AVENQ9NQS1 362 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-214ENST00000590556 EHD2Q9NZN4 543 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 MYO6Q9UM54 1294 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.24■□□□□ 0.831e-8■□□□□ 8.9
DDX39A-214ENST00000590556 ITIH6Q6UXX5 1313 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 NOTCH4Q99466 2003 aa20.24■□□□□ 0.83
DDX39A-214ENST00000590556 ZNF197O14709 1029 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 RTN3O95197 1032 aaPredicted RBP20.23■□□□□ 0.83
DDX39A-214ENST00000590556 FGF19O95750 216 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 SETSIPP0DME0 302 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 KRT9P35527 623 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 PDE6CP51160 858 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 ARID5AQ03989 594 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 PDE4CQ08493 712 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 PKDCCQ504Y2 493 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 SPECC1LQ69YQ0 1117 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 TMC8Q8IU68 726 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 GPIHBP1Q8IV16 184 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 FMNL3Q8IVF7 1028 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 VSTM4Q8IW00 320 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 TRMT2BQ96GJ1 504 aaKnown RBP20.23■□□□□ 0.83
DDX39A-214ENST00000590556 MYRFLQ96LU7 910 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 PNPLA8Q9NP80 782 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 MRPS23Q9Y3D9 190 aaKnown RBP20.23■□□□□ 0.83
DDX39A-214ENST00000590556 GREB1Q4ZG55 1949 aa20.23■□□□□ 0.83
DDX39A-214ENST00000590556 SPTBN5Q9NRC6 3674 aaKnown RBP20.22■□□□□ 0.83
DDX39A-214ENST00000590556 A0A1W2PQJ5 194 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 HHLA1C9JL84 531 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 TNFRSF10BO14763 440 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 XPO1O14980 1071 aaKnown RBP20.22■□□□□ 0.83
DDX39A-214ENST00000590556 FERP16591 822 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 SLC5A3P53794 718 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 USP46P62068 366 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 IFRD2Q12894 506 aaPredicted RBP20.22■□□□□ 0.83
DDX39A-214ENST00000590556 MEA1Q16626 185 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 DENND1BQ6P3S1 775 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 ZNF397Q8NF99 534 aaPredicted RBP20.22■□□□□ 0.83
DDX39A-214ENST00000590556 CPLX3Q8WVH0 158 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 SECISBP2LQ93073 1101 aaKnown RBP20.22■□□□□ 0.83
DDX39A-214ENST00000590556 ASB2Q96Q27 587 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 TTLL2Q9BWV7 592 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 COMMD8Q9NX08 183 aa20.22■□□□□ 0.83
DDX39A-214ENST00000590556 UXTQ9UBK9 157 aaPredicted RBP20.22■□□□□ 0.83
DDX39A-214ENST00000590556 LRRC53A6NM62 1247 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 CFHP08603 1231 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 CCDC172P0C7W6 258 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 IL9P15248 144 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 YWHAQP27348 245 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 GABRR2P28476 465 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 CCR2P41597 374 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 ZNF75DP51815 510 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 SLC5A9Q2M3M2 681 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 PRSS36Q5K4E3 855 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 TAF3Q5VWG9 929 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 NOP9Q86U38 636 aaKnown RBP20.21■□□□□ 0.83
DDX39A-214ENST00000590556 PIGZQ86VD9 579 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 SCAMP5Q8TAC9 235 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 ITFG1Q8TB96 612 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 EPS8L1Q8TE68 723 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 TCEAL4Q96EI5 215 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 GCNAQ96QF7 691 aa20.21■□□□□ 0.83
DDX39A-214ENST00000590556 PHF7Q9BWX1 381 aaPredicted RBP20.21■□□□□ 0.83
DDX39A-214ENST00000590556 PDCL3Q9H2J4 239 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms