RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 USP4Q13107 963 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 NR1H3Q13133 447 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 BIRC3Q13489 604 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 NCOA4Q13772 614 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 PKP1Q13835 747 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 MTF1Q14872 753 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 ZNF77Q15935 545 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 ZNF699Q32M78 642 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 FBXO43Q4G163 708 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 TMEM196Q5HYL7 178 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 MDH1BQ5I0G3 518 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 SDHAF4Q5VUM1 108 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 LAIR1Q6GTX8 287 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 TXNDC11Q6PKC3 985 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 LONP2Q86WA8 852 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 B3GALNT2Q8NCR0 500 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 PDZD8Q8NEN9 1154 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 OR6B3Q8NGW1 331 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 TMC2Q8TDI7 906 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 PARD3BQ8TEW8 1205 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 OSCP1Q8WVF1 389 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 OVCA2Q8WZ82 227 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 PCED1BQ96HM7 432 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 FAM84AQ96KN4 292 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 TNIP3Q96KP6 325 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 SLITRK1Q96PX8 696 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 SMG9Q9H0W8 520 aaKnown RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 KCTD10Q9H3F6 313 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 TRPC7Q9HCX4 862 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 ARHGAP26Q9UNA1 814 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 CCL26Q9Y258 94 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 FRMD4BQ9Y2L6 1034 aa8.1□□□□□ -1.11
NPC1-208ENST00000590301 EP300Q09472 2414 aaPredicted RBP8.1□□□□□ -1.11
NPC1-208ENST00000590301 FRYLO94915 3013 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 SPTBN4Q9H254 2564 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 FAM186AA6NE01 2351 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 GPR179Q6PRD1 2367 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 LRRIQ3A6PVS8 624 aaPredicted RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 A8MXQ7 604 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 PRR5-ARHGAP8B1AHC4 643 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 CHURC1-FNTBB4DL54 471 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 F8VP50 259 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 K7ESF4 209 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 SLC9A3R1O14745 358 aaPredicted RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 RHOBTB3O94955 611 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 RTN3O95197 1032 aaPredicted RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 NFATC1O95644 943 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 NR3C1P04150 777 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 HDCP19113 662 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 BDNFP23560 247 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 RPL13P26373 211 aaKnown RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 SYKP43405 635 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 IFNAR2P48551 515 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 CDR1P51861 262 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 SLC7A9P82251 487 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 ARHGAP8P85298 464 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 SATB1Q01826 763 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 LMNB2Q03252 620 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 GAS6Q14393 721 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 PUM1Q14671 1186 aaKnown RBP eCLIP8.09□□□□□ -1.11
NPC1-208ENST00000590301 PON2Q15165 354 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 NFIL3Q16649 462 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 SGSM1Q2NKQ1 1148 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 KMT5BQ4FZB7 885 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 ZNF667Q5HYK9 610 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 TDRD10Q5VZ19 366 aaKnown RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 SCARA3Q6AZY7 606 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 TSSK4Q6SA08 328 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 WDR5BQ86VZ2 330 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 DDX42Q86XP3 938 aaKnown RBP eCLIP8.09□□□□□ -1.11
NPC1-208ENST00000590301 GRAMD1CQ8IYS0 662 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 KIAA0895Q8NCT3 520 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 SH3RF2Q8TEC5 729 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 ZNF516Q92618 1163 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 P2RY13Q9BPV8 354 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 MRPL45Q9BRJ2 306 aaKnown RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 GTPBP4Q9BZE4 634 aaKnown RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 ECT2Q9H8V3 914 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 SCUBE2Q9NQ36 999 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 HPS4Q9NQG7 708 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 RBM12Q9NTZ6 932 aaKnown RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 COMMD8Q9NX08 183 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 DUS2Q9NX74 493 aaKnown RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 GCNT4Q9P109 453 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 NXF1Q9UBU9 619 aaKnown RBP8.09□□□□□ -1.11
NPC1-208ENST00000590301 GMEB2Q9UKD1 530 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 TRAF3IP3Q9Y228 551 aa8.09□□□□□ -1.11
NPC1-208ENST00000590301 MYH15Q9Y2K3 1946 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 MYO10Q9HD67 2058 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 A0A1B0GVL5 298 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 ZNF840PA6NDX5 716 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 HCRTO43612 131 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 AKAP3O75969 853 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 OLFM2O95897 454 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 C4BPAP04003 597 aaKnown RBP8.08□□□□□ -1.12
NPC1-208ENST00000590301 RETP07949 1114 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 GJA4P35212 333 aa8.08□□□□□ -1.12
NPC1-208ENST00000590301 NDUFA8P51970 172 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms