RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 TDRD10Q5VZ19 366 aaKnown RBP19.22■□□□□ 0.67
H3F3B-209ENST00000589949 LAIR1Q6GTX8 287 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 CC2D1AQ6P1N0 951 aaPredicted RBP19.22■□□□□ 0.67
H3F3B-209ENST00000589949 DGLUCYQ7Z3D6 616 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 OR6B3Q8NGW1 331 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 OSCP1Q8WVF1 389 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 TTLL2Q9BWV7 592 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 B3GNT5Q9BYG0 378 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 RNF38Q9H0F5 515 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 SDCBP2Q9H190 292 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 SNX25Q9H3E2 840 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 SMYD3Q9H7B4 428 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 DMAC2Q9NW81 257 aa19.22■□□□□ 0.67
H3F3B-209ENST00000589949 DUS2Q9NX74 493 aaKnown RBP19.22■□□□□ 0.67
H3F3B-209ENST00000589949 NXF1Q9UBU9 619 aaKnown RBP19.22■□□□□ 0.67
H3F3B-209ENST00000589949 LRRIQ3A6PVS8 624 aaPredicted RBP19.21■□□□□ 0.67
H3F3B-209ENST00000589949 EXOC3O60645 756 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 STAU1O95793 577 aaKnown RBP19.21■□□□□ 0.67
H3F3B-209ENST00000589949 HSP90AA1P07900 732 aaKnown RBP19.21■□□□□ 0.67
H3F3B-209ENST00000589949 HDCP19113 662 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 DLG4P78352 724 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 CLDN10P78369 228 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 GRSF1Q12849 480 aaKnown RBP eCLIP19.21■□□□□ 0.67
H3F3B-209ENST00000589949 MAPRE1Q15691 268 aaKnown RBP19.21■□□□□ 0.67
H3F3B-209ENST00000589949 GAB4Q2WGN9 574 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 KMT5BQ4FZB7 885 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 ATL3Q6DD88 541 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 DENND5BQ6ZUT9 1274 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 PARD3BQ8TEW8 1205 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 KCTD10Q9H3F6 313 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 GMEB2Q9UKD1 530 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 USP18Q9UMW8 372 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 ARHGAP26Q9UNA1 814 aa19.21■□□□□ 0.67
H3F3B-209ENST00000589949 A0A1B0GVL5 298 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 ZNF840PA6NDX5 716 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 RNF40O75150 1001 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 VNN1O95497 513 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 C4BPAP04003 597 aaKnown RBP19.2■□□□□ 0.66
H3F3B-209ENST00000589949 FAM163BP0C2L3 166 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 PFKFB1P16118 471 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 RAP1GAPP47736 663 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 NOP14P78316 857 aaKnown RBP19.2■□□□□ 0.66
H3F3B-209ENST00000589949 PAQR9Q6ZVX9 377 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 WDR5BQ86VZ2 330 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 SECISBP2LQ93073 1101 aaKnown RBP19.2■□□□□ 0.66
H3F3B-209ENST00000589949 C8orf48Q96LL4 319 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 P2RY13Q9BPV8 354 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 CGNQ9P2M7 1197 aaKnown RBP19.2■□□□□ 0.66
H3F3B-209ENST00000589949 CFAP45Q9UL16 551 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 HPSEQ9Y251 543 aa19.2■□□□□ 0.66
H3F3B-209ENST00000589949 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.2■□□□□ 0.66
H3F3B-209ENST00000589949 SCAMP3O14828 347 aaKnown RBP19.19■□□□□ 0.66
H3F3B-209ENST00000589949 RETP07949 1114 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 PDIA4P13667 645 aaKnown RBP19.19■□□□□ 0.66
H3F3B-209ENST00000589949 TCF3P15923 654 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 ATXN1P54253 815 aaKnown RBP19.19■□□□□ 0.66
H3F3B-209ENST00000589949 TNNC1P63316 161 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 TRPC3Q13507 836 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 KCNB1Q14721 858 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 CEP57L1Q8IYX8 460 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 CPA6Q8N4T0 437 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 FAM160A2Q8N612 972 aaPredicted RBP19.19■□□□□ 0.66
H3F3B-209ENST00000589949 GPR161Q8N6U8 529 aaKnown RBP19.19■□□□□ 0.66
H3F3B-209ENST00000589949 FSIP1Q8NA03 581 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 B3GALNT2Q8NCR0 500 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 CEP295NLQ96MC4 621 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 KCNK16Q96T55 309 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 RAB23Q9ULC3 237 aa19.19■□□□□ 0.66
H3F3B-209ENST00000589949 HELZP42694 1942 aaKnown RBP19.18■□□□□ 0.66
H3F3B-209ENST00000589949 A8MXQ7 604 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 TRIM66O15016 1216 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 OLFM2O95897 454 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 CMA1P23946 247 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 ANXA13P27216 316 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 ATICP31939 592 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 CNR2P34972 360 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 IFNAR2P48551 515 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 TAF10Q12962 218 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 C1orf220Q5T0J3 134 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 ATP2A3Q93084 1043 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 VRTNQ9H8Y1 702 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 TRPM5Q9NZQ8 1165 aa19.18■□□□□ 0.66
H3F3B-209ENST00000589949 NCOR2Q9Y618 2525 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 LEFTY2O00292 366 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 PHACTR2O75167 634 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 OAS1P00973 400 aaKnown RBP19.17■□□□□ 0.66
H3F3B-209ENST00000589949 PRR29P0C7W0 189 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 DRD1P21728 446 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 OPRD1P41143 372 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 SLC7A9P82251 487 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 LMNB2Q03252 620 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 MESP2Q0VG99 397 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 BIRC3Q13489 604 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 NCOA4Q13772 614 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 SCARA5Q6ZMJ2 495 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 SLC9A9Q8IVB4 645 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 SFTPA1Q8IWL2 248 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 TMEM174Q8WUU8 243 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 CD101Q93033 1021 aa19.17■□□□□ 0.66
H3F3B-209ENST00000589949 SYAP1Q96A49 352 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms