RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TAS1R1Q7RTX1 841 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 COLGALT1Q8NBJ5 622 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 UBE2Q2Q8WVN8 375 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 KCTD13Q8WZ19 329 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 SMOQ99835 787 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 ZBED2Q9BTP6 218 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 OXCT2Q9BYC2 517 aaPredicted RBP18.37■□□□□ 0.53
CXXC1-212ENST00000589940 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 SLC4A7Q9Y6M7 1214 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 H7C4K7 107 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 OR4Q2P0C623 313 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 COMTP21964 271 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 FAM102AQ5T9C2 384 aaPredicted RBP18.37■□□□□ 0.53
CXXC1-212ENST00000589940 OLFML1Q6UWY5 402 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 SPATA2LQ8IUW3 424 aaPredicted RBP18.37■□□□□ 0.53
CXXC1-212ENST00000589940 TMEM169Q96HH4 297 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 HES6Q96HZ4 224 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 SLC9A7Q96T83 725 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 VN1R3Q9BXE9 311 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 CSNK1G1Q9HCP0 422 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 METTL5Q9NRN9 209 aaKnown RBP18.37■□□□□ 0.53
CXXC1-212ENST00000589940 INSL6Q9Y581 213 aa18.37■□□□□ 0.53
CXXC1-212ENST00000589940 PAPSS1O43252 624 aaPredicted RBP18.36■□□□□ 0.53
CXXC1-212ENST00000589940 PROSCO94903 275 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 TCP1P17987 556 aaKnown RBP18.36■□□□□ 0.53
CXXC1-212ENST00000589940 BDNFP23560 247 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 CACNA2D1P54289 1103 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 NFE2Q16621 373 aaPredicted RBP18.36■□□□□ 0.53
CXXC1-212ENST00000589940 COL13A1Q5TAT6 717 aaPredicted RBP18.36■□□□□ 0.53
CXXC1-212ENST00000589940 SCUBE3Q8IX30 993 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 PHOSPHO2Q8TCD6 241 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 OSBPL9Q96SU4 736 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 RHOBTB2Q9BYZ6 727 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 UBXN6Q9BZV1 441 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 TMEM30AQ9NV96 361 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 IP6K2Q9UHH9 426 aa18.36■□□□□ 0.53
CXXC1-212ENST00000589940 TBC1D4O60343 1298 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 RFC1P35251 1148 aaPredicted RBP18.35■□□□□ 0.53
CXXC1-212ENST00000589940 SLC1A1P43005 524 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 HERC6Q8IVU3 1022 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 ZMIZ2Q8NF64 920 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 KCNK16Q96T55 309 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 MTIF3Q9H2K0 278 aaKnown RBP18.35■□□□□ 0.53
CXXC1-212ENST00000589940 AAASQ9NRG9 546 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 SPG21Q9NZD8 308 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 SPOPO43791 374 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 SRGAP2O75044 1071 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 SOD2P04179 222 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 LCP1P13796 627 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 MAN1A1P33908 653 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 PPM1AP35813 382 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 DNA2P51530 1060 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 SLC6A3Q01959 620 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 CFAP221Q4G0U5 840 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 FIBCD1Q8N539 461 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 JOSD2Q8TAC2 188 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.35■□□□□ 0.53
CXXC1-212ENST00000589940 FNIP1Q8TF40 1166 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 FUBP3Q96I24 572 aaKnown RBP eCLIP18.35■□□□□ 0.53
CXXC1-212ENST00000589940 PIWIL1Q96J94 861 aaKnown RBP18.35■□□□□ 0.53
CXXC1-212ENST00000589940 PSMB7Q99436 277 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 RAD9AQ99638 391 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 DMAP1Q9NPF5 467 aaPredicted RBP18.35■□□□□ 0.53
CXXC1-212ENST00000589940 CHST7Q9NS84 486 aa18.35■□□□□ 0.53
CXXC1-212ENST00000589940 MIF4GDA9UHW6 222 aaKnown RBP18.34■□□□□ 0.53
CXXC1-212ENST00000589940 RIOK3O14730 519 aaKnown RBP18.34■□□□□ 0.53
CXXC1-212ENST00000589940 ATP2A2P16615 1042 aaKnown RBP18.34■□□□□ 0.53
CXXC1-212ENST00000589940 SCNN1AP37088 669 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 ADIGQ0VDE8 80 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 CD101Q93033 1021 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 LRRC4Q9HBW1 653 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 OGDHQ02218 1023 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 ZNF252P-AS1Q0IIN9 211 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 CPNE8Q86YQ8 564 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 PIK3R5Q8WYR1 880 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 TMEM59LQ9UK28 342 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 PCDHB12Q9Y5F1 795 aa18.34■□□□□ 0.53
CXXC1-212ENST00000589940 CCDC85CA6NKD9 419 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 CXCR5P32302 372 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 PIGHQ14442 188 aaPredicted RBP18.33■□□□□ 0.53
CXXC1-212ENST00000589940 WHAMMP3Q1A5X7 153 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 RAB41Q5JT25 222 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 KIAA1841Q6NSI8 718 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 PRSS55Q6UWB4 352 aaPredicted RBP18.33■□□□□ 0.53
CXXC1-212ENST00000589940 RSPO2Q6UXX9 243 aaPredicted RBP18.33■□□□□ 0.53
CXXC1-212ENST00000589940 SIX6OS1Q8N1H7 587 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 EMC1Q8N766 993 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 NIPA2Q8N8Q9 360 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 COG1Q8WTW3 980 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 RIN2Q8WYP3 895 aaPredicted RBP18.33■□□□□ 0.53
CXXC1-212ENST00000589940 CLP1Q92989 425 aaKnown RBP18.33■□□□□ 0.53
CXXC1-212ENST00000589940 HERC2P3Q9BVR0 1158 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 PNPLA8Q9NP80 782 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 ABI2Q9NYB9 513 aaPredicted RBP18.33■□□□□ 0.53
CXXC1-212ENST00000589940 MTRRQ9UBK8 725 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 PCDHB5Q9Y5E4 795 aa18.33■□□□□ 0.53
CXXC1-212ENST00000589940 NLRC5Q86WI3 1866 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 HHLA1C9JL84 531 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 KCNK3O14649 394 aa18.33■□□□□ 0.52
CXXC1-212ENST00000589940 DDX3YO15523 660 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms