RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 TOP6BLQ8N6T0 577 aa20.67■□□□□ 0.9
PTBP1-215ENST00000589883 SHKBP1Q8TBC3 707 aa20.67■□□□□ 0.9
PTBP1-215ENST00000589883 TAF4BQ92750 862 aa20.67■□□□□ 0.9
PTBP1-215ENST00000589883 NELL1Q92832 810 aa20.67■□□□□ 0.9
PTBP1-215ENST00000589883 VPS16Q9H269 839 aa20.67■□□□□ 0.9
PTBP1-215ENST00000589883 EPC1Q9H2F5 836 aa20.67■□□□□ 0.9
PTBP1-215ENST00000589883 SMYD3Q9H7B4 428 aa20.67■□□□□ 0.9
PTBP1-215ENST00000589883 COL4A3Q01955 1670 aa20.67■□□□□ 0.9
PTBP1-215ENST00000589883 DCHS1Q96JQ0 3298 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 A0A1W2PRU2 124 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 DPYSL4O14531 572 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 CHADO15335 359 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 LILRB5O75023 590 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 CAVIN2O95810 425 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 OR4Q2P0C623 313 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 ZNF18P17022 549 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 RAP1GAPP47736 663 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 TUFMP49411 452 aaKnown RBP20.66■□□□□ 0.9
PTBP1-215ENST00000589883 ZNF445P59923 1031 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 CETN1Q12798 172 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 LRMPQ12912 555 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 FZD5Q13467 585 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 VEPH1Q14D04 833 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 WDR44Q5JSH3 913 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 MIIPQ5JXC2 388 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 OSTM1Q86WC4 334 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 DCLK2Q8N568 766 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 FAM200AQ8TCP9 573 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 MRPL45Q9BRJ2 306 aaKnown RBP20.66■□□□□ 0.9
PTBP1-215ENST00000589883 CRACR2AQ9BSW2 395 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 NDST4Q9H3R1 872 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 C8orf33Q9H7E9 229 aaPredicted RBP20.66■□□□□ 0.9
PTBP1-215ENST00000589883 LMAN1LQ9HAT1 526 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 RAB23Q9ULC3 237 aa20.66■□□□□ 0.9
PTBP1-215ENST00000589883 MTMR11A4FU01 709 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 PMM2O15305 246 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 P4HA2O15460 535 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 HCRTO43612 131 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 P4HA1P13674 534 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 CDH8P55286 799 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 SMARCB1Q12824 385 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 LRRC32Q14392 662 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 DNAJB7Q7Z6W7 309 aaPredicted RBP20.65■□□□□ 0.9
PTBP1-215ENST00000589883 TMC8Q8IU68 726 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 THEM5Q8N1Q8 247 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 TMEM86AQ8N2M4 240 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 ANKRD20A12PQ8NF67 263 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 TATDN2Q93075 761 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 PSMG2Q969U7 264 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 GCNAQ96QF7 691 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 TMEM209Q96SK2 561 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 NIF3L1Q9GZT8 377 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 SDCBP2Q9H190 292 aa20.65■□□□□ 0.9
PTBP1-215ENST00000589883 DDX43Q9NXZ2 648 aaKnown RBP20.65■□□□□ 0.9
PTBP1-215ENST00000589883 SMG5Q9UPR3 1016 aaKnown RBP20.65■□□□□ 0.9
PTBP1-215ENST00000589883 SHISA7A6NL88 538 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 TPM2P07951 284 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 ACAT1P24752 427 aaKnown RBP20.64■□□□□ 0.89
PTBP1-215ENST00000589883 ASPAP45381 313 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 KPNA1P52294 538 aaPredicted RBP20.64■□□□□ 0.89
PTBP1-215ENST00000589883 COPB1P53618 953 aaKnown RBP20.64■□□□□ 0.89
PTBP1-215ENST00000589883 FCHO2Q0JRZ9 810 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 TSSK4Q6SA08 328 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 DPH6Q7L8W6 267 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 LIMS2Q7Z4I7 341 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 ZNF687Q8N1G0 1237 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 ATAD1Q8NBU5 361 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 OR10T2Q8NGX3 314 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 C2orf15Q8WU43 125 aaKnown RBP20.64■□□□□ 0.89
PTBP1-215ENST00000589883 KBTBD7Q8WVZ9 684 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 LRRC3Q9BY71 257 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 INTS2Q9H0H0 1204 aaKnown RBP20.64■□□□□ 0.89
PTBP1-215ENST00000589883 ATXN3LQ9H3M9 355 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 OBP2AQ9NY56 170 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 GCNT4Q9P109 453 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 LIMA1Q9UHB6 759 aaKnown RBP20.64■□□□□ 0.89
PTBP1-215ENST00000589883 ZMYM5Q9UJ78 669 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 GMEB2Q9UKD1 530 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 SLC27A5Q9Y2P5 690 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 TICRRQ7Z2Z1 1910 aa20.64■□□□□ 0.89
PTBP1-215ENST00000589883 GPR179Q6PRD1 2367 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 TSC2P49815 1807 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 GOLGA6L19H0YKK7 550 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 VNN2O95498 520 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 WARSP23381 471 aaKnown RBP20.63■□□□□ 0.89
PTBP1-215ENST00000589883 CDR1P51861 262 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 TAF12Q16514 161 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 ARHGAP29Q52LW3 1261 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 ARID3BQ8IVW6 561 aaPredicted RBP20.63■□□□□ 0.89
PTBP1-215ENST00000589883 RNF214Q8ND24 703 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 EHBP1Q8NDI1 1231 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 OR6B3Q8NGW1 331 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 LMO3Q8TAP4 145 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 NT5C1BQ96P26 610 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 CRISPLD1Q9H336 500 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 SNX25Q9H3E2 840 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 CACNA1AO00555 2505 aa20.63■□□□□ 0.89
PTBP1-215ENST00000589883 PRR5-ARHGAP8B1AHC4 643 aa20.62■□□□□ 0.89
PTBP1-215ENST00000589883 NRG2O14511 850 aaPredicted RBP20.62■□□□□ 0.89
PTBP1-215ENST00000589883 GABRDO14764 452 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms