RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 NKD2Q969F2 451 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-208ENST00000588692 ZFYVE19Q96K21 471 aa15.37■□□□□ 0.05
DDX39A-208ENST00000588692 B3GNT5Q9BYG0 378 aa15.37■□□□□ 0.05
DDX39A-208ENST00000588692 ZNF518BQ9C0D4 1074 aa15.37■□□□□ 0.05
DDX39A-208ENST00000588692 SDCBP2Q9H190 292 aa15.37■□□□□ 0.05
DDX39A-208ENST00000588692 TMEM8AQ9HCN3 771 aa15.37■□□□□ 0.05
DDX39A-208ENST00000588692 TRPC7Q9HCX4 862 aa15.37■□□□□ 0.05
DDX39A-208ENST00000588692 TRPM5Q9NZQ8 1165 aa15.37■□□□□ 0.05
DDX39A-208ENST00000588692 NDRG2Q9UN36 371 aaKnown RBP15.37■□□□□ 0.05
DDX39A-208ENST00000588692 CCL26Q9Y258 94 aa15.37■□□□□ 0.05
DDX39A-208ENST00000588692 SPECC1L-ADORA2AF8WAN1 911 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 KINO60870 393 aaKnown RBP15.36■□□□□ 0.05
DDX39A-208ENST00000588692 SP9P0CG40 484 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 CCNE1P24864 410 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 CTHP32929 405 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 RAP1GAPP47736 663 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 LRRC63Q05C16 580 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 PPP3CAQ08209 521 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 LRRC32Q14392 662 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 ITPRIPL2Q3MIP1 535 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 KRT39Q6A163 491 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 CC2D1AQ6P1N0 951 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-208ENST00000588692 SMARCD1Q96GM5 515 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 CHRDQ9H2X0 955 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 SEMA4AQ9H3S1 761 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 GTSE1Q9NYZ3 720 aa15.36■□□□□ 0.05
DDX39A-208ENST00000588692 ZFHX2Q9C0A1 2572 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-208ENST00000588692 SLC16A3O15427 465 aaKnown RBP15.35■□□□□ 0.05
DDX39A-208ENST00000588692 RTN3O95197 1032 aaPredicted RBP15.35■□□□□ 0.05
DDX39A-208ENST00000588692 TCF3P15923 654 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 PPP1R2P41236 205 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 USP46P62068 366 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 FKBP3Q00688 224 aaKnown RBP15.35■□□□□ 0.05
DDX39A-208ENST00000588692 INCA1Q0VD86 236 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 USP4Q13107 963 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 STIM1Q13586 685 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 PDGFRLQ15198 375 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 SPOPLQ6IQ16 392 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 MAMSTRQ6ZN01 415 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 FAM35AQ86V20 835 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 CRYBG2Q8N1P7 616 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 PDZD8Q8NEN9 1154 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 TAS1R2Q8TE23 839 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 FAXDC2Q96IV6 333 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 SLITRK1Q96PX8 696 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 DNAI2Q9GZS0 605 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 NIF3L1Q9GZT8 377 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 CYP3A43Q9HB55 503 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 DMAP1Q9NPF5 467 aaPredicted RBP15.35■□□□□ 0.05
DDX39A-208ENST00000588692 GKN1Q9NS71 199 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 GCNT4Q9P109 453 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 VPS13AQ96RL7 3174 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 USP34Q70CQ2 3546 aa15.35■□□□□ 0.05
DDX39A-208ENST00000588692 C2orf78A6NCI8 922 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 PRR23AA6NEV1 266 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 CLDN5O00501 218 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 PSMA7O14818 248 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 SOX9P48436 509 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 MXI1P50539 228 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 NDST1P52848 882 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 CACNA2D1P54289 1103 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 TNK2Q07912 1038 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 MTF1Q14872 753 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 ZNF77Q15935 545 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 DGKKQ5KSL6 1271 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 ACOT1Q86TX2 421 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 ZC3H3Q8IXZ2 948 aaKnown RBP15.34■□□□□ 0.05
DDX39A-208ENST00000588692 MAML2Q8IZL2 1156 aaPredicted RBP15.34■□□□□ 0.05
DDX39A-208ENST00000588692 ADSSL1Q8N142 457 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 NUP93Q8N1F7 819 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 OVCA2Q8WZ82 227 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 ELMO3Q96BJ8 720 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 SLC22A12Q96S37 553 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 MED10Q9BTT4 135 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 LMAN1LQ9HAT1 526 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 PRMT8Q9NR22 394 aaPredicted RBP15.34■□□□□ 0.05
DDX39A-208ENST00000588692 TMEM30AQ9NV96 361 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 ARHGAP26Q9UNA1 814 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 MYH10P35580 1976 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 MYO15AQ9UKN7 3530 aa15.34■□□□□ 0.05
DDX39A-208ENST00000588692 ZNF840PA6NDX5 716 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 CHRNB1P11230 501 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 HDCP19113 662 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 AMPD2Q01433 879 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 MTAPQ13126 283 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 RUNX3Q13761 415 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 PPP2R5DQ14738 602 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 PAQR9Q6ZVX9 377 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 FUKQ8N0W3 1084 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 TTC39CQ8N584 583 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 ARL14EPQ8N8R7 260 aaPredicted RBP15.33■□□□□ 0.05
DDX39A-208ENST00000588692 FBXL13Q8NEE6 735 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.05
DDX39A-208ENST00000588692 CYP2S1Q96SQ9 504 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 FAM124BQ9H5Z6 455 aaPredicted RBP15.33■□□□□ 0.05
DDX39A-208ENST00000588692 MMRN2Q9H8L6 949 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 APOBEC3GQ9HC16 384 aaKnown RBP15.33■□□□□ 0.05
DDX39A-208ENST00000588692 HPS4Q9NQG7 708 aa15.33■□□□□ 0.05
DDX39A-208ENST00000588692 KRT82Q9NSB4 513 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms