RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 NUP93Q8N1F7 819 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 PDZD8Q8NEN9 1154 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 ITFG1Q8TB96 612 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 FGF13Q92913 245 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 SPAG5Q96R06 1193 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 HSD3B7Q9H2F3 369 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 FBXO44Q9H4M3 255 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 TSPAN16Q9UKR8 245 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 VCANP13611 3396 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 PATJQ8NI35 1801 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 LOC730098B7Z3J9 87 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 M0QYV0 167 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 THAP12O43422 761 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 SETSIPP0DME0 302 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 PPP3CCP48454 512 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 ZNF132P52740 706 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 BPIFB4P59827 614 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 PTK2Q05397 1052 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 BST2Q10589 180 aaKnown RBP12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 TEAD2Q15562 447 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 PRSS36Q5K4E3 855 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 CLEC20AQ6ZU45 233 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 CACNA2D4Q7Z3S7 1137 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 FMNL3Q8IVF7 1028 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 ANKRD52Q8NB46 1076 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 STKLD1Q8NE28 680 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 FEZF2Q8TBJ5 459 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 SHC3Q92529 594 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 MYRFLQ96LU7 910 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 ERGIC2Q96RQ1 377 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 MYADMQ96S97 322 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 DUSP16Q9BY84 665 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 CSNK1G1Q9HCP0 422 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 ZNF334Q9HCZ1 680 aaPredicted RBP12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 SIX2Q9NPC8 291 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 COMMD8Q9NX08 183 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 TRPM5Q9NZQ8 1165 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 EPS15L1Q9UBC2 864 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 CEP83Q9Y592 693 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 FHOD1Q9Y613 1164 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 MYO16Q9Y6X6 1858 aa12.56□□□□□ -0.4
SDHDP1-201ENST00000588055 O00370 1275 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 CBFA2T2O43439 604 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 LAMP2P13473 410 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 BRD2P25440 801 aaKnown RBP12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 YWHAQP27348 245 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 AVPR1AP37288 418 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 CACNA2D1P54289 1103 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 UBASH3AP57075 661 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 POLR2FP61218 127 aaKnown RBP12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 APBA1Q02410 837 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 KCNMA1Q12791 1236 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 MTMR3Q13615 1198 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 GPR158Q5T848 1215 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 PAQR9Q6ZVX9 377 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 SHKBP1Q8TBC3 707 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 OVCA2Q8WZ82 227 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 NXPE3Q969Y0 559 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 TCEAL4Q96EI5 215 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 MCRS1Q96EZ8 462 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 NECAB3Q96P71 396 aaPredicted RBP12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 KCNK16Q96T55 309 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 SMOQ99835 787 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 PDCL3Q9H2J4 239 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 TRPC7Q9HCX4 862 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 IGSF9Q9P2J2 1179 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 CNTN6Q9UQ52 1028 aa12.55□□□□□ -0.4
SDHDP1-201ENST00000588055 A0A1B0GTH6 734 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 F8VZ95 297 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 DPYSL4O14531 572 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 XPO1O14980 1071 aaKnown RBP12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 ABL1P00519 1130 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 HMGA1P17096 107 aaKnown RBP12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 GJA1P17302 382 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 CCR2P41597 374 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 CYP4F8P98187 520 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 FANCCQ00597 558 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 DRAP1Q14919 205 aaPredicted RBP12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 MEA1Q16626 185 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 LCLAT1Q6UWP7 414 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 GAREM2Q75VX8 874 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 SIX6OS1Q8N1H7 587 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 NOX5Q96PH1 765 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 TTLL2Q9BWV7 592 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 LRRC3Q9BY71 257 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 STK33Q9BYT3 514 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 NACA2Q9H009 215 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 GANQ9H2C0 597 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 NLRC4Q9NPP4 1024 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 SIK3Q9Y2K2 1263 aa12.54□□□□□ -0.4
SDHDP1-201ENST00000588055 OBSL1O75147 1896 aa12.53□□□□□ -0.4
SDHDP1-201ENST00000588055 NUP210Q8TEM1 1887 aaPredicted RBP12.53□□□□□ -0.4
SDHDP1-201ENST00000588055 GREB1Q4ZG55 1949 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms