RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ZNF333Q96JL9 665 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 MED10Q9BTT4 135 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 TBC1D13Q9NVG8 400 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ASNSD1Q9NWL6 643 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 PCDHB7Q9Y5E2 793 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ARHGEF37A1IGU5 675 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ZSCAN5CA6NGD5 496 aaPredicted RBP20.86■□□□□ 0.93
TRIM47-204ENST00000587339 C2CD4BA6NLJ0 364 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 PHF2O75151 1096 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ITGB1P05556 798 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 PDGFRAP16234 1089 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 FLT3P36888 993 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 FAAP100Q0VG06 881 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 PAQR9Q6ZVX9 377 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 RCOR2Q8IZ40 523 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ARFGAP1Q8N6T3 406 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 MAIP1Q8WWC4 291 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 RBM41Q96IZ5 413 aaKnown RBP20.86■□□□□ 0.93
TRIM47-204ENST00000587339 CNPY3Q9BT09 278 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 MYBPHLA2RUH7 354 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 B4GALT3O60512 393 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 KRT1P04264 644 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 MYBL2P10244 700 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 RARAP10276 462 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 RALAP11233 206 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 LCP1P13796 627 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 CHRNA3P32297 505 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 CCL23P55773 120 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 TLE2Q04725 743 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 TAF5Q15542 800 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 TRIM60Q495X7 471 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 TXNRD3NBQ6F5E7 133 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 CTU1Q7Z7A3 348 aaKnown RBP20.85■□□□□ 0.93
TRIM47-204ENST00000587339 PIGZQ86VD9 579 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 MYCBPAPQ8TBZ2 947 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 RXFP2Q8WXD0 754 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 MAGOHBQ96A72 148 aaKnown RBP20.85■□□□□ 0.93
TRIM47-204ENST00000587339 RNF25Q96BH1 459 aaPredicted RBP20.85■□□□□ 0.93
TRIM47-204ENST00000587339 PCED1BQ96HM7 432 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 SUSD3Q96L08 255 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 TOX2Q96NM4 488 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 FAM193BQ96PV7 902 aaPredicted RBP20.85■□□□□ 0.93
TRIM47-204ENST00000587339 PPP1R12CQ9BZL4 782 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 GDF3Q9NR23 364 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 KLHL11Q9NVR0 708 aa20.85■□□□□ 0.93
TRIM47-204ENST00000587339 DDX56Q9NY93 547 aaKnown RBP20.85■□□□□ 0.93
TRIM47-204ENST00000587339 F8W810 466 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 TTI1O43156 1089 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 PARNO95453 639 aaKnown RBP20.84■□□□□ 0.93
TRIM47-204ENST00000587339 KRT7P08729 469 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 FAM200BP0CF97 657 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 TNFRSF8P28908 595 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 CDR1P51861 262 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 DR1Q01658 176 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 SLC25A11Q02978 314 aaKnown RBP20.84■□□□□ 0.93
TRIM47-204ENST00000587339 SIX1Q15475 284 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-204ENST00000587339 COLGALT2Q8IYK4 626 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 ACBD6Q9BR61 282 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 OSBPL8Q9BZF1 889 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 KRT82Q9NSB4 513 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRIM47-204ENST00000587339 ESYT3A0FGR9 886 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 BEST1O76090 585 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 OR1G1P47890 313 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 CYP1B1Q16678 543 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 TRNP1Q6NT89 227 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 FBXO46Q6PJ61 603 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-204ENST00000587339 CLEC20AQ6ZU45 233 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 GSPT2Q8IYD1 628 aaKnown RBP20.84■□□□□ 0.93
TRIM47-204ENST00000587339 RTP3Q9BQQ7 232 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 HEMGNQ9BXL5 484 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 LRFN2Q9ULH4 789 aa20.84■□□□□ 0.93
TRIM47-204ENST00000587339 PI4K2BG5E9Z4 385 aa20.83■□□□□ 0.93
TRIM47-204ENST00000587339 DHX34Q14147 1143 aaKnown RBP20.83■□□□□ 0.93
TRIM47-204ENST00000587339 C1orf53Q5VUE5 145 aa20.83■□□□□ 0.93
TRIM47-204ENST00000587339 OVOS1Q6IE37 1185 aa20.83■□□□□ 0.93
TRIM47-204ENST00000587339 CCDC137Q6PK04 289 aaKnown RBP20.83■□□□□ 0.93
TRIM47-204ENST00000587339 SLC26A9Q7LBE3 791 aa20.83■□□□□ 0.93
TRIM47-204ENST00000587339 KHSRPQ92945 711 aaKnown RBP eCLIP20.83■□□□□ 0.93
TRIM47-204ENST00000587339 CFAP57Q96MR6 1250 aa20.83■□□□□ 0.93
TRIM47-204ENST00000587339 SLITRK1Q96PX8 696 aa20.83■□□□□ 0.93
TRIM47-204ENST00000587339 ZWILCHQ9H900 591 aa20.83■□□□□ 0.93
TRIM47-204ENST00000587339 TMEM189-UBE2V1I3L0A0 370 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 ATP8B1O43520 1251 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 DESP17661 470 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 IL1R2P27930 398 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 MIPP30301 263 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 SDC4P31431 198 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 PCK1P35558 622 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 SCNN1AP37088 669 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 MAP3K7CLP57077 242 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 COPS2P61201 443 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 KLF1Q13351 362 aaPredicted RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 SMTNL2Q2TAL5 461 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 FAM35AQ86V20 835 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 THEM5Q8N1Q8 247 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 CLEC4CQ8WTT0 213 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 IFT81Q8WYA0 676 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 ACSF2Q96CM8 615 aaPredicted RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 HERPUD2Q9BSE4 406 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms