RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 CARD6Q9BX69 1037 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 MCOLN1Q9GZU1 580 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CARD9Q9H257 536 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 METTL5Q9NRN9 209 aaKnown RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 ASNSD1Q9NWL6 643 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 DDX56Q9NY93 547 aaKnown RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 USTQ9Y2C2 406 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 DENND4CQ5VZ89 1909 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 COL4A6Q14031 1691 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 OR6C75A6NL08 312 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 SIGLEC16A6NMB1 481 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 E5RJQ4 531 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CCDC188H7C350 402 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 DYNC1I1O14576 645 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 GABRDO14764 452 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 NRP1O14786 923 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CAPN9O14815 690 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 TRIM66O15016 1216 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 NCK2O43639 380 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CEP104O60308 925 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 HSF2BPO75031 334 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 ERLIN1O75477 346 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 AP1G2O75843 785 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 PROSCO94903 275 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 ABL1P00519 1130 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 ERBB2P04626 1255 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 TUBBP07437 444 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 LCP1P13796 627 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 GPD1P21695 349 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 COMTP21964 271 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 ACAT1P24752 427 aaKnown RBP6.51□□□□□ -1.37
LIG3-206ENST00000586058 CTNNA2P26232 953 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 SDC4P31431 198 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CA8P35219 290 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CTNNA1P35221 906 aaKnown RBP6.51□□□□□ -1.37
LIG3-206ENST00000586058 SCNN1AP37088 669 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 GPD2P43304 727 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 PLA2G4AP47712 749 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 GABRB2P47870 512 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 PTPN5P54829 565 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 BTG3Q14201 252 aaPredicted RBP6.51□□□□□ -1.37
LIG3-206ENST00000586058 MAP9Q49MG5 647 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 PTPN20Q4JDL3 420 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CTXN3Q4LDR2 81 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 TIGD5Q53EQ6 642 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 C8orf74Q6P047 294 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 FUT10Q6P4F1 479 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 THSD4Q6ZMP0 1018 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 ANKS3Q6ZW76 656 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 SLFN11Q7Z7L1 901 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 NT5DC3Q86UY8 548 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CMTR2Q8IYT2 770 aaKnown RBP6.51□□□□□ -1.37
LIG3-206ENST00000586058 C12orf29Q8N999 325 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 LRRC57Q8N9N7 239 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 C3orf58Q8NDZ4 430 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 MYCBPAPQ8TBZ2 947 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 FNIP1Q8TF40 1166 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 ZDHHC16Q969W1 377 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 MYLPFQ96A32 169 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 FAM149B1Q96BN6 582 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 HES6Q96HZ4 224 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 ZNF558Q96NG5 402 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CPXM1Q96SM3 734 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 YME1L1Q96TA2 773 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 HNRNPABQ99729 332 aaKnown RBP6.51□□□□□ -1.37
LIG3-206ENST00000586058 ZSWIM1Q9BR11 485 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 TLR10Q9BXR5 811 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 DUSP16Q9BY84 665 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 CXCL16Q9H2A7 254 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 DPEP3Q9H4B8 488 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 DMAP1Q9NPF5 467 aaPredicted RBP6.51□□□□□ -1.37
LIG3-206ENST00000586058 IL23AQ9NPF7 189 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 MIOSQ9NXC5 875 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 EHD2Q9NZN4 543 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 RASAL2Q9UJF2 1139 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 PACSIN2Q9UNF0 486 aaPredicted RBP6.51□□□□□ -1.37
LIG3-206ENST00000586058 SSX2IPQ9Y2D8 614 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 RWDD3Q9Y3V2 267 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 ALG6Q9Y672 507 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 SHROOM3Q8TF72 1996 aa6.51□□□□□ -1.37
LIG3-206ENST00000586058 I3L4J1 428 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 KRIT1O00522 736 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 PRPSAP2O60256 369 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 LPXNO60711 386 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 DDHD2O94830 711 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 FGBP02675 491 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 KRT1P04264 644 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 URODP06132 367 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 CSF2RAP15509 400 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 LMO2P25791 158 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 CXCR5P32302 372 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 GTF2F1P35269 517 aaKnown RBP eCLIP6.5□□□□□ -1.37
LIG3-206ENST00000586058 GRIK1P39086 918 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 RGS7P49802 495 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 BCAR1P56945 870 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 MAP3K7CLP57077 242 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 WDR5P61964 334 aaKnown RBP6.5□□□□□ -1.37
LIG3-206ENST00000586058 AMPD2Q01433 879 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 SLC6A3Q01959 620 aa6.5□□□□□ -1.37
LIG3-206ENST00000586058 KRT17Q04695 432 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms