RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DENND5BQ6ZUT9 1274 aa15.47■□□□□ 0.07
SDF2-202ENST00000585428 TTC16Q8NEE8 873 aa15.47■□□□□ 0.07
SDF2-202ENST00000585428 ANKRD36BP1Q96IX9 119 aa15.47■□□□□ 0.07
SDF2-202ENST00000585428 SYT15Q9BQS2 421 aa15.47■□□□□ 0.07
SDF2-202ENST00000585428 CACNA1BQ00975 2339 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 LEFTY2O00292 366 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 NFATC1O95644 943 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 OLFM2O95897 454 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 SYT1P21579 422 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 PSMC1P62191 440 aaKnown RBP15.46■□□□□ 0.07
SDF2-202ENST00000585428 NOP14P78316 857 aaKnown RBP15.46■□□□□ 0.07
SDF2-202ENST00000585428 CREB5Q02930 508 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 CEBPZQ03701 1054 aaKnown RBP15.46■□□□□ 0.07
SDF2-202ENST00000585428 USP39Q53GS9 565 aaKnown RBP15.46■□□□□ 0.07
SDF2-202ENST00000585428 CBWD2Q8IUF1 395 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 GLIS3Q8NEA6 775 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 MYCBPAPQ8TBZ2 947 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 MYLPFQ96A32 169 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 PCED1BQ96HM7 432 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 C8orf48Q96LL4 319 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 TRPM5Q9NZQ8 1165 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 INVSQ9Y283 1065 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 NME7Q9Y5B8 376 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 CFAP47Q6ZTR5 3102 aa15.46■□□□□ 0.07
SDF2-202ENST00000585428 DENND4CQ5VZ89 1909 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 RALGAPA1Q6GYQ0 2036 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 C4orf47A7E2U8 309 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 TNNC2P02585 160 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 CHRM1P11229 460 aaPredicted RBP15.45■□□□□ 0.06
SDF2-202ENST00000585428 GNL1P36915 607 aaPredicted RBP15.45■□□□□ 0.06
SDF2-202ENST00000585428 STAT6P42226 847 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 CRY1Q16526 586 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 C2orf27AQ580R0 203 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 PMS2CLQ68D20 193 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 TRAPPC11Q7Z392 1133 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 C11orf74Q86VG3 221 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 WDR49Q8IV35 697 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 CCDC65Q8IXS2 484 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 TSTD1Q8NFU3 115 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 NOC3LQ8WTT2 800 aaKnown RBP15.45■□□□□ 0.06
SDF2-202ENST00000585428 UPF2Q9HAU5 1272 aaKnown RBP15.45■□□□□ 0.06
SDF2-202ENST00000585428 KIAA1586Q9HCI6 787 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 EHD2Q9NZN4 543 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 MMP17Q9ULZ9 603 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 R3HCC1Q9Y3T6 440 aaKnown RBP15.45■□□□□ 0.06
SDF2-202ENST00000585428 SDK1Q7Z5N4 2213 aa15.45■□□□□ 0.06
SDF2-202ENST00000585428 CDX4O14627 284 aaPredicted RBP15.44■□□□□ 0.06
SDF2-202ENST00000585428 TRIM66O15016 1216 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 TACC1O75410 805 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 OAS1P00973 400 aaKnown RBP15.44■□□□□ 0.06
SDF2-202ENST00000585428 SLC6A11P48066 632 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 VASPP50552 380 aaPredicted RBP15.44■□□□□ 0.06
SDF2-202ENST00000585428 MRPS21P82921 87 aaKnown RBP15.44■□□□□ 0.06
SDF2-202ENST00000585428 CYP27A1Q02318 531 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 DHCR24Q15392 516 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 RHBDF2Q6PJF5 856 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 TMEM92Q6UXU6 159 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 EPM2AIP1Q7L775 607 aaPredicted RBP15.44■□□□□ 0.06
SDF2-202ENST00000585428 FILIP1Q7Z7B0 1213 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 OLIG1Q8TAK6 271 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 ZNF507Q8TCN5 953 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 HPS3Q969F9 1004 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 CNOT6LQ96LI5 555 aaKnown RBP15.44■□□□□ 0.06
SDF2-202ENST00000585428 USP28Q96RU2 1077 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 MMS19Q96T76 1030 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 MRPL45Q9BRJ2 306 aaKnown RBP15.44■□□□□ 0.06
SDF2-202ENST00000585428 EDEM2Q9BV94 578 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 TMEM30AQ9NV96 361 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 KBTBD4Q9NVX7 518 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 HSPBP1Q9NZL4 362 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 WASF3Q9UPY6 502 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 GREB1Q4ZG55 1949 aa15.44■□□□□ 0.06
SDF2-202ENST00000585428 LNP1A1A4G5 178 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 F8VP50 259 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 TGFB1I1O43294 461 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 CYP17A1P05093 508 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 HNRNPLP14866 589 aaKnown RBP eCLIP15.43■□□□□ 0.06
SDF2-202ENST00000585428 PTPN1P18031 435 aaKnown RBP15.43■□□□□ 0.06
SDF2-202ENST00000585428 GBP1P32455 592 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 CACNA2D1P54289 1103 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 SEC13P55735 322 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 MESP2Q0VG99 397 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 TAF10Q12962 218 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 E2F4Q16254 413 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 PSAPL1Q6NUJ1 521 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 CNNM4Q6P4Q7 775 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 STXBP4Q6ZWJ1 553 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 SFTPA1Q8IWL2 248 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 CCDC33Q8N5R6 958 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 PDILTQ8N807 584 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 MDGA1Q8NFP4 955 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 ZNF516Q92618 1163 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 TPSD1Q9BZJ3 242 aa15.43■□□□□ 0.06
SDF2-202ENST00000585428 SLC9A3R1O14745 358 aaPredicted RBP15.42■□□□□ 0.06
SDF2-202ENST00000585428 GIPC1O14908 333 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 KHNYNO15037 678 aaKnown RBP15.42■□□□□ 0.06
SDF2-202ENST00000585428 BCKDHBP21953 392 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 ANXA13P27216 316 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 EIF2DP41214 584 aaKnown RBP15.42■□□□□ 0.06
SDF2-202ENST00000585428 KIR2DL1P43626 348 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms