RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 NR1I3Q14994 352 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 CCDC142Q17RM4 750 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 SMYD5Q6GMV2 418 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 GRASPQ7Z6J2 395 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-215ENST00000584944 GPR152Q8TDT2 470 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 WHAMMQ8TF30 809 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 SHC3Q92529 594 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 PKMYT1Q99640 499 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 HNRNPABQ99729 332 aaKnown RBP14.68□□□□□ -0.06
TRAF4-215ENST00000584944 XPO4Q9C0E2 1151 aaKnown RBP14.68□□□□□ -0.06
TRAF4-215ENST00000584944 SLITRK6Q9H5Y7 841 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 SIX2Q9NPC8 291 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 CEP72Q9P209 647 aa14.68□□□□□ -0.06
TRAF4-215ENST00000584944 UXTQ9UBK9 157 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-215ENST00000584944 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.065e-8■■■■□ 23.6
TRAF4-215ENST00000584944 F8VZ95 297 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 M0QYV0 167 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 FOXN3O00409 490 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-215ENST00000584944 CYP26A1O43174 497 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 ACO1P21399 889 aaKnown RBP14.67□□□□□ -0.06
TRAF4-215ENST00000584944 BCAT1P54687 386 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 MAP3K7CLP57077 242 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 ARID5AQ03989 594 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 TSR1Q2NL82 804 aaKnown RBP14.67□□□□□ -0.06
TRAF4-215ENST00000584944 ARHGAP15Q53QZ3 475 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 PPP1R26Q5T8A7 1209 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-215ENST00000584944 APTXQ7Z2E3 356 aaKnown RBP14.67□□□□□ -0.06
TRAF4-215ENST00000584944 FUKQ8N0W3 1084 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 PBXIP1Q96AQ6 731 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 C8orf48Q96LL4 319 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 CEP295NLQ96MC4 621 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 RBSNQ9H1K0 784 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 SIK3Q9Y2K2 1263 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 MRPS23Q9Y3D9 190 aaKnown RBP14.67□□□□□ -0.06
TRAF4-215ENST00000584944 NR2E1Q9Y466 385 aa14.67□□□□□ -0.06
TRAF4-215ENST00000584944 RTN3O95197 1032 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-215ENST00000584944 POU2F2P09086 479 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 NPR3P17342 541 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 FSHRP23945 695 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 BRD2P25440 801 aaKnown RBP14.66□□□□□ -0.06
TRAF4-215ENST00000584944 GBP2P32456 591 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-215ENST00000584944 SNX16P57768 344 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 SIGLEC14Q08ET2 396 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 SDHAF4Q5VUM1 108 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 ARHGAP17Q68EM7 881 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 DENND5BQ6ZUT9 1274 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 DNAJB7Q7Z6W7 309 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-215ENST00000584944 ANKRD52Q8NB46 1076 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 PSMG2Q969U7 264 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 ACSF2Q96CM8 615 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-215ENST00000584944 NOX5Q96PH1 765 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 SLITRK1Q96PX8 696 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 DUSP16Q9BY84 665 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 GANQ9H2C0 597 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 CRISPLD1Q9H336 500 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 TSPAN16Q9UKR8 245 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 NME7Q9Y5B8 376 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 CLUHO75153 1309 aa14.66□□□□□ -0.06
TRAF4-215ENST00000584944 MYO10Q9HD67 2058 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 PLXNA3P51805 1871 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 SLC38A8A6NNN8 435 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 GFPT2O94808 682 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 VNN2O95498 520 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 ABL1P00519 1130 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 RHOP08100 348 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 SETSIPP0DME0 302 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 ATF6P18850 670 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 CDC25CP30307 473 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 SOX5P35711 763 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 GPR15P49685 360 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 BST2Q10589 180 aaKnown RBP14.65□□□□□ -0.06
TRAF4-215ENST00000584944 TRIM14Q14142 442 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 CNGA2Q16280 664 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 IER5LQ5T953 404 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 SPECC1LQ69YQ0 1117 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 GET4Q7L5D6 327 aaPredicted RBP14.65□□□□□ -0.06
TRAF4-215ENST00000584944 OTOP3Q7RTS5 596 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 DRC7Q8IY82 874 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 FAM71AQ8IYT1 594 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 NUP93Q8N1F7 819 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 SIX6OS1Q8N1H7 587 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 UBR7Q8N806 425 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 PRSS33Q8NF86 280 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 CPLX3Q8WVH0 158 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 ZNF707Q96C28 371 aaPredicted RBP14.65□□□□□ -0.06
TRAF4-215ENST00000584944 ASIC4Q96FT7 647 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 SPATA17Q96L03 361 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 KCNK16Q96T55 309 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 NUCKS1Q9H1E3 243 aaKnown RBP14.65□□□□□ -0.06
TRAF4-215ENST00000584944 FBXO44Q9H4M3 255 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 SYNCQ9H7C4 482 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 LRRC4Q9HBW1 653 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 WDR6Q9NNW5 1121 aaKnown RBP14.65□□□□□ -0.06
TRAF4-215ENST00000584944 ST7Q9NRC1 585 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 SEPT11Q9NVA2 429 aaKnown RBP14.65□□□□□ -0.06
TRAF4-215ENST00000584944 HCFC1R1Q9NWW0 138 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.65□□□□□ -0.06
TRAF4-215ENST00000584944 CNTN6Q9UQ52 1028 aa14.65□□□□□ -0.06
TRAF4-215ENST00000584944 RNF225M0QZC1 329 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-215ENST00000584944 O00370 1275 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms