RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CYP2U1Q7Z449 544 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 TMEM150AQ86TG1 271 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 LRRTM3Q86VH5 581 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 CD302Q8IX05 232 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 THEM5Q8N1Q8 247 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 MAB21L3Q8N8X9 362 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 SYT2Q8N9I0 419 aaPredicted RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 FBXO18Q8NFZ0 1043 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 OR10T2Q8NGX3 314 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 RPLP0P6Q8NHW5 317 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 GIPC2Q8TF65 315 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 C2orf15Q8WU43 125 aaKnown RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 EDARADDQ8WWZ3 215 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 KCNN1Q92952 543 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 USP13Q92995 863 aaPredicted RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 TCEAL3Q969E4 200 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 EXOC4Q96A65 974 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 SENP8Q96LD8 212 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 GCNAQ96QF7 691 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 SEPT5Q99719 369 aaPredicted RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 P2RY13Q9BPV8 354 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 MMTAG2Q9BU76 263 aaKnown RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 EDEM2Q9BV94 578 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 ZCWPW1Q9H0M4 648 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 RPF1Q9H9Y2 349 aaKnown RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 TDP1Q9NUW8 608 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 LARSQ9P2J5 1176 aaKnown RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 DSEQ9UL01 958 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 TBX20Q9UMR3 447 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 NOL7Q9UMY1 257 aaKnown RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 CCL26Q9Y258 94 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 COL4A2P08572 1712 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 A0A0B4J269 797 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 LNP1A1A4G5 178 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 ANO9A1A5B4 782 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 TMEM8BA6NDV4 472 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 H0YCG3 227 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 LAD1O00515 517 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 CYB561D2O14569 222 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 CDX4O14627 284 aaPredicted RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 OGTO15294 1046 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 FAM189A1O60320 539 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 APBB3O95704 486 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 TOP3BO95985 862 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 ODC1P11926 461 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 ARSAP15289 507 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 HMGA1P17096 107 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 SPINK2P20155 84 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 CSRP1P21291 193 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 AMPD1P23109 780 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 U2AF2P26368 475 aaKnown RBP eCLIP5.75□□□□□ -1.494e-7■■■□□ 15.6
VAPA-207ENST00000583879 NMT1P30419 496 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 GBP1P32455 592 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 GJA4P35212 333 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 PRPHP41219 470 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 LIG4P49917 911 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 TOB1P50616 345 aaPredicted RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 CDR1P51861 262 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 DGKEP52429 567 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 NCKAP1LP55160 1127 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 IRX4P78413 519 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 ZNF252P-AS1Q0IIN9 211 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 GNL2Q13823 731 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 DMC1Q14565 340 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 ZNF268Q14587 947 aaPredicted RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 KARSQ15046 597 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 PDGFRLQ15198 375 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 ENOX2Q16206 610 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 USP39Q53GS9 565 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 HYIQ5T013 277 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 TXNDC8Q6A555 127 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 JADE1Q6IE81 842 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 DTHD1Q6ZMT9 781 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 C1orf229Q6ZS94 237 aaPredicted RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 C11orf74Q86VG3 221 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 MON1AQ86VX9 555 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 METTL23Q86XA0 190 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 DCP1BQ8IZD4 617 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 GOLGA6L1Q8N7Z2 621 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 CCDC26Q8TAB7 109 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 SPPL2BQ8TCT7 592 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 EZH1Q92800 747 aaPredicted RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 CD101Q93033 1021 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 BICD1Q96G01 975 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 PNMA5Q96PV4 448 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 HHIPQ96QV1 700 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 LLPHQ9BRT6 129 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 SCNM1Q9BWG6 230 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 GZF1Q9H116 711 aaPredicted RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 ECT2Q9H8V3 914 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 KIF9Q9HAQ2 790 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 KCND2Q9NZV8 630 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 CPSF3Q9UKF6 684 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 INVSQ9Y283 1065 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 DERAQ9Y315 318 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 PCDHB6Q9Y5E3 794 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 ARID2Q68CP9 1835 aa5.75□□□□□ -1.49
VAPA-207ENST00000583879 TPRP12270 2363 aaKnown RBP5.75□□□□□ -1.49
VAPA-207ENST00000583879 ACACBO00763 2458 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms