RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 FTH1P19P0C7X4 201 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 CSH1P0DML2 217 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 CSH2P0DML3 217 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 HMGA1P17096 107 aaKnown RBP11.55□□□□□ -0.56
TOP3A-210ENST00000580713 ATP2C1P98194 919 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-210ENST00000580713 C19orf57Q0VDD7 668 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 ZBTB6Q15916 424 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 EML3Q32P44 896 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 CCNI2Q6ZMN8 369 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-210ENST00000580713 EFCAB13Q8IY85 973 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 TXNDC5Q8NBS9 432 aaKnown RBP11.55□□□□□ -0.56
TOP3A-210ENST00000580713 C2orf15Q8WU43 125 aaKnown RBP11.55□□□□□ -0.56
TOP3A-210ENST00000580713 HMGB4Q8WW32 186 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 ADAMTS14Q8WXS8 1223 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 BICD1Q96G01 975 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 CYP2S1Q96SQ9 504 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 LINC00597Q9H2U6 94 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 DDX19AQ9NUU7 478 aaKnown RBP11.55□□□□□ -0.56
TOP3A-210ENST00000580713 DSEQ9UL01 958 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 PCDHA7Q9UN72 937 aa11.55□□□□□ -0.56
TOP3A-210ENST00000580713 LOC400499M0QZD8 3231 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 APC2O95996 2303 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 TRAV19A0A0A6YYK7 116 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 LAD1O00515 517 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 AP5Z1O43299 807 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 CUTAO60888 179 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 NFATC1O95644 943 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 MBD3O95983 291 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 SYPP08247 313 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 CD59P13987 128 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 HNRNPLP14866 589 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 HOXD12P35452 270 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 TNFSF9P41273 254 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 GPR15P49685 360 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 MRPS21P82921 87 aaKnown RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 RPL6Q02878 288 aaKnown RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 MCL1Q07820 350 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 ZNF77Q15935 545 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 SKOR2Q2VWA4 1001 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 SPDYCQ5MJ68 293 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 SDHAF4Q5VUM1 108 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 ADALQ6DHV7 355 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 RABEPKQ7Z6M1 372 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 LRRTM3Q86VH5 581 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 DCP1BQ8IZD4 617 aaKnown RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 DAW1Q8N136 415 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 ALLCQ8N6M5 410 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 SH3RF2Q8TEC5 729 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 PI4K2AQ9BTU6 479 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 TMEM206Q9H813 350 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 RPF1Q9H9Y2 349 aaKnown RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 UXTQ9UBK9 157 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 APOBEC2Q9Y235 224 aaKnown RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 PCDHB5Q9Y5E4 795 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 URB1O60287 2271 aaKnown RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 LAMA5O15230 3695 aa11.54□□□□□ -0.56
TOP3A-210ENST00000580713 SMG1Q96Q15 3661 aaKnown RBP11.54□□□□□ -0.56
TOP3A-210ENST00000580713 TCRBV21S2A2A0A5A6 115 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 MYMKA6NI61 221 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 ARHGAP33O14559 1287 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 CYB561D2O14569 222 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 TRAK2O60296 914 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 PRB1P04280 392 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 CYP11A1P05108 521 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 PAX3P23760 479 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 OPRD1P41143 372 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 SMTNP53814 917 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 USP4Q13107 963 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 MAP7D1Q3KQU3 841 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 EOGTQ5NDL2 527 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 SPATA1Q5VX52 437 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 C9orf57Q5W0N0 161 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 ARL6IP4Q66PJ3 421 aaKnown RBP11.53□□□□□ -0.56
TOP3A-210ENST00000580713 ZPBP2Q6X784 338 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 C4orf32Q8N8J7 132 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 ARL14EPQ8N8R7 260 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-210ENST00000580713 PYM1Q9BRP8 204 aaKnown RBP11.53□□□□□ -0.56
TOP3A-210ENST00000580713 RUSC1Q9BVN2 902 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 C17orf75Q9HAS0 396 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 CAPN10Q9HC96 672 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 LRWD1Q9UFC0 647 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 FBXO2Q9UK22 296 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-210ENST00000580713 DNM3Q9UQ16 869 aa11.53□□□□□ -0.56
TOP3A-210ENST00000580713 SRPRBQ9Y5M8 271 aaKnown RBP11.53□□□□□ -0.56
TOP3A-210ENST00000580713 ADAMTS9Q9P2N4 1935 aa11.52□□□□□ -0.56
TOP3A-210ENST00000580713 A0A1W2PQ27 194 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 A0A1W2PQ64 194 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 A0A1W2PQD8 194 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 E9PMD0 336 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 SGK1O00141 431 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 PRPHP41219 470 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 TSPY1Q01534 308 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 ZNF33AQ06730 810 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 RAD51AP2Q09MP3 1159 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 KCNB1Q14721 858 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 ENOX2Q16206 610 aaKnown RBP11.52□□□□□ -0.57
TOP3A-210ENST00000580713 KYAT1Q16773 422 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms