RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 WDR44Q5JSH3 913 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 DGKKQ5KSL6 1271 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 TCERG1LQ5VWI1 586 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 FRMD5Q7Z6J6 570 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 TMEM150AQ86TG1 271 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 NUP93Q8N1F7 819 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 CPA6Q8N4T0 437 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 USP13Q92995 863 aaPredicted RBP21.4■■□□□ 1.02
SMG8-204ENST00000580498 PHOX2BQ99453 314 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 SMG9Q9H0W8 520 aaKnown RBP21.4■■□□□ 1.02
SMG8-204ENST00000580498 DPEP3Q9H4B8 488 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 LMAN1LQ9HAT1 526 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 GKN1Q9NS71 199 aa21.4■■□□□ 1.02
SMG8-204ENST00000580498 PTPRDP23468 1912 aa21.39■■□□□ 1.02
SMG8-204ENST00000580498 OBSL1O75147 1896 aa21.39■■□□□ 1.02
SMG8-204ENST00000580498 ARNTLO00327 626 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 SLC16A3O15427 465 aaKnown RBP21.39■■□□□ 1.01
SMG8-204ENST00000580498 SP9P0CG40 484 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 TRIM49P0CI25 452 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 TRIM49CP0CI26 452 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 CTHP32929 405 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 PRCPP42785 496 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 MXI1P50539 228 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 CCR3P51677 355 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 NRLP54845 237 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 IFRD2Q12894 506 aaPredicted RBP21.39■■□□□ 1.01
SMG8-204ENST00000580498 SMYD4Q8IYR2 804 aaPredicted RBP21.39■■□□□ 1.01
SMG8-204ENST00000580498 ENGASEQ8NFI3 743 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 FAXDC2Q96IV6 333 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 ZFYVE19Q96K21 471 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 TTLL2Q9BWV7 592 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 B3GNT5Q9BYG0 378 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 ZNF518BQ9C0D4 1074 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 COMMD8Q9NX08 183 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 PCDHA5Q9Y5H7 936 aa21.39■■□□□ 1.01
SMG8-204ENST00000580498 YWHAQP27348 245 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 NDST1P52848 882 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 CSTF1Q05048 431 aaKnown RBP21.38■■□□□ 1.01
SMG8-204ENST00000580498 RUNX3Q13761 415 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 MTF1Q14872 753 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 ZCWPW2Q504Y3 356 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 ACOT1Q86TX2 421 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 FAM35AQ86V20 835 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 DDX42Q86XP3 938 aaKnown RBP eCLIP21.38■■□□□ 1.01
SMG8-204ENST00000580498 ATRIPQ8WXE1 791 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 OVCA2Q8WZ82 227 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 ATP2A3Q93084 1043 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 FBXO32Q969P5 355 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 NT5C1AQ9BXI3 368 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 FAM126AQ9BYI3 521 aaPredicted RBP21.38■■□□□ 1.01
SMG8-204ENST00000580498 NIF3L1Q9GZT8 377 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 CHRDQ9H2X0 955 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 GTSE1Q9NYZ3 720 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 F5P12259 2224 aa21.38■■□□□ 1.01
SMG8-204ENST00000580498 NCANO14594 1321 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 AP1G2O75843 785 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 GRSF1Q12849 480 aaKnown RBP eCLIP21.37■■□□□ 1.01
SMG8-204ENST00000580498 DCAF17Q5H9S7 520 aaPredicted RBP21.37■■□□□ 1.01
SMG8-204ENST00000580498 SYNPOQ8N3V7 929 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 ARL14EPQ8N8R7 260 aaPredicted RBP21.37■■□□□ 1.01
SMG8-204ENST00000580498 FBXL13Q8NEE6 735 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 TTC8Q8TAM2 541 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 DHTKD1Q96HY7 919 aaPredicted RBP21.37■■□□□ 1.01
SMG8-204ENST00000580498 FBXO44Q9H4M3 255 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 METTL14Q9HCE5 456 aaKnown RBP21.37■■□□□ 1.01
SMG8-204ENST00000580498 KRT82Q9NSB4 513 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 DUS2Q9NX74 493 aaKnown RBP21.37■■□□□ 1.01
SMG8-204ENST00000580498 ARHGAP26Q9UNA1 814 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 MYH10P35580 1976 aa21.37■■□□□ 1.01
SMG8-204ENST00000580498 GREB1Q4ZG55 1949 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 BICDL2A1A5D9 508 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 CLDN5O00501 218 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 TADA3O75528 432 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 FAM200BP0CF97 657 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 ANP32AP39687 249 aaKnown RBP21.36■■□□□ 1.01
SMG8-204ENST00000580498 YWHAEP62258 255 aaKnown RBP21.36■■□□□ 1.01
SMG8-204ENST00000580498 CETN1Q12798 172 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 CRYBG2Q8N1P7 616 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 TAS1R2Q8TE23 839 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 OSCP1Q8WVF1 389 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 NACA2Q9H009 215 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 FAM124BQ9H5Z6 455 aaPredicted RBP21.36■■□□□ 1.01
SMG8-204ENST00000580498 ARMCX3Q9UH62 379 aaPredicted RBP21.36■■□□□ 1.01
SMG8-204ENST00000580498 CCL26Q9Y258 94 aa21.36■■□□□ 1.01
SMG8-204ENST00000580498 PATJQ8NI35 1801 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 PRR23AA6NEV1 266 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 SLC9A3R1O14745 358 aaPredicted RBP21.35■■□□□ 1.01
SMG8-204ENST00000580498 NFATC1O95644 943 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 LMNAP02545 664 aaKnown RBP21.35■■□□□ 1.01
SMG8-204ENST00000580498 TCF3P15923 654 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 ASPAP45381 313 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 PPP3CAQ08209 521 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 TAF10Q12962 218 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 SPOPLQ6IQ16 392 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 KIAA1958Q8N8K9 716 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 CCDC26Q8TAB7 109 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 SPATA20Q8TB22 786 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 SH3RF2Q8TEC5 729 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 LRRC3BQ96PB8 259 aa21.35■■□□□ 1.01
SMG8-204ENST00000580498 FAM83CQ9BQN1 747 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms