RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 SIGLEC16A6NMB1 481 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 HCRTO43612 131 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 RPSAP08865 295 aaKnown RBP10.99□□□□□ -0.65
TOP3A-209ENST00000580095 PAX7P23759 505 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 EIF3EP60228 445 aaKnown RBP10.99□□□□□ -0.65
TOP3A-209ENST00000580095 IL9RQ01113 521 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 RNASELQ05823 741 aaKnown RBP10.99□□□□□ -0.65
TOP3A-209ENST00000580095 AMHR2Q16671 573 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 SH3D19Q5HYK7 790 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 KIRREL3Q8IZU9 778 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 NETO2Q8NC67 525 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 SPATA18Q8TC71 538 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 NKD2Q969F2 451 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-209ENST00000580095 IFT122Q9HBG6 1241 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 KLHL14Q9P2G3 628 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 NR2E3Q9Y5X4 410 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 ALOX15BO15296 676 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 MGRN1O60291 552 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 COQ9O75208 318 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 ASMTLO95671 621 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 ITGAVP06756 1048 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 CYP2C8P10632 490 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 RBP3P10745 1247 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 INSRRP14616 1297 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 CYP3A5P20815 502 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 ADRA1DP25100 572 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PTPN11Q06124 597 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 MKRN3Q13064 507 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 LRRC38Q5VT99 294 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 ANKRD23Q86SG2 305 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 FZD8Q9H461 694 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PCDH9Q9HC56 1237 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 FAM49BQ9NUQ9 324 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 XPO7Q9UIA9 1087 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 DCTN4Q9UJW0 460 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PHTF1Q9UMS5 762 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 USP18Q9UMW8 372 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 HEY1Q9Y5J3 304 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 E5RJQ4 531 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 FAM155BO75949 473 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 NEBLO76041 1014 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PROZP22891 400 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 TARSP26639 723 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 CDH6P55285 790 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 COPS2P61201 443 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 KCTD2Q14681 263 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 MTFR1Q15390 333 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 NOL9Q5SY16 702 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 OR6B2Q6IFH4 312 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 ZNF449Q6P9G9 518 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 LVRNQ6Q4G3 990 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PPP1R21Q6ZMI0 780 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 P3H4Q92791 437 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 ERP27Q96DN0 273 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 STAMBPL1Q96FJ0 436 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 ADPGKQ9BRR6 497 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 ETAA1Q9NY74 926 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 SLC17A7Q9P2U7 560 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PRKAG3Q9UGI9 489 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 RABGEF1Q9UJ41 708 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PCDHGC3Q9UN70 934 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 BRCA1P38398 1863 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 IGKV6-21A0A0C4DH24 114 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 B4GALT4O60513 344 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 TGFB3P10600 412 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 NQO1P15559 274 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 NDST1P52848 882 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 AP3M2P53677 418 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 IRX1P78414 480 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 HADHQ16836 314 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 GALNTL6Q49A17 601 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 HHATQ5VTY9 493 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PALM2Q8IXS6 379 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 HPDLQ96IR7 371 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 FAM167AQ96KS9 214 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 MMP19Q99542 508 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 LBHD1Q9BQE6 289 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 MYLK2Q9H1R3 596 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 IRAK4Q9NWZ3 460 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 DDX56Q9NY93 547 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 DRG1Q9Y295 367 aaKnown RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 FARP1Q9Y4F1 1045 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-209ENST00000580095 HES2Q9Y543 173 aa10.98□□□□□ -0.65
TOP3A-209ENST00000580095 PPEF2O14830 753 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 PDGFRAP16234 1089 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 TFE3P19532 575 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-209ENST00000580095 CDH5P33151 784 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-209ENST00000580095 BNIP1Q12981 228 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 SLC10A6Q3KNW5 377 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 DRICH1Q6PGQ1 229 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-209ENST00000580095 DARS2Q6PI48 645 aaKnown RBP10.97□□□□□ -0.65
TOP3A-209ENST00000580095 RELL1Q8IUW5 271 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 SULF1Q8IWU6 871 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 SCUBE3Q8IX30 993 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 DENND1AQ8TEH3 1009 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 TMEM176AQ96HP8 235 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 PAFAH2Q99487 392 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 B3GNT5Q9BYG0 378 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 ZNF518BQ9C0D4 1074 aa10.97□□□□□ -0.65
TOP3A-209ENST00000580095 ETNK1Q9HBU6 452 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms