RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 DDX42Q86XP3 938 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAF4-214ENST00000580073 SCN4BQ8IWT1 228 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 HPS3Q969F9 1004 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 SPATA17Q96L03 361 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 HHIPQ96QV1 700 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 SYT15Q9BQS2 421 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 CUEDC2Q9H467 287 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 PANK4Q9NVE7 773 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 TMLHEQ9NVH6 421 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 C2orf42Q9NWW7 574 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 TBC1D7Q9P0N9 293 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 MAGEC2Q9UBF1 373 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-214ENST00000580073 EBF1Q9UH73 591 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 GTF3C4Q9UKN8 822 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 ARHGAP26Q9UNA1 814 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 SDK1Q7Z5N4 2213 aa14.29□□□□□ -0.12
TRAF4-214ENST00000580073 ZNF233A6NK53 670 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 SLC9A3R1O14745 358 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-214ENST00000580073 GABRDO14764 452 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 KLRC4O43908 158 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 GDF9O60383 454 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 UBE4BO95155 1302 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 AMPD3Q01432 767 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 DUOXA2Q1HG44 320 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 PLA2G2CQ5R387 149 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 LMBRD2Q68DH5 695 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-214ENST00000580073 CNNM4Q6P4Q7 775 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 DENND5BQ6ZUT9 1274 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 WDR49Q8IV35 697 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 GLIS3Q8NEA6 775 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 TTC16Q8NEE8 873 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 TSTD1Q8NFU3 115 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 HPDLQ96IR7 371 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 PKMYT1Q99640 499 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 CBWD1Q9BRT8 395 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 IKZF4Q9H2S9 585 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 INTS13Q9NVM9 706 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 TRPM5Q9NZQ8 1165 aa14.28□□□□□ -0.12
TRAF4-214ENST00000580073 CNOT1A5YKK6 2376 aaKnown RBP14.27□□□□□ -0.12
TRAF4-214ENST00000580073 ATP8B3O60423 1300 aa14.27□□□□□ -0.12
TRAF4-214ENST00000580073 EIF3DO15371 548 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAF4-214ENST00000580073 ALDH1A2O94788 518 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 PRPF6O94906 941 aaKnown RBP14.27□□□□□ -0.13
TRAF4-214ENST00000580073 HDCP19113 662 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 GBP1P32455 592 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 DPP6P42658 865 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 PXNP49023 591 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-214ENST00000580073 GALK1P51570 392 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 CDR1P51861 262 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 CASP5P51878 434 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 KCNA1Q09470 495 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 SF3A2Q15428 464 aaKnown RBP14.27□□□□□ -0.13
TRAF4-214ENST00000580073 EML3Q32P44 896 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 PLK5Q496M5 336 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 HSF5Q4G112 596 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-214ENST00000580073 USP39Q53GS9 565 aaKnown RBP14.27□□□□□ -0.13
TRAF4-214ENST00000580073 STPG1Q5TH74 334 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 SDHAF4Q5VUM1 108 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 RNF43Q68DV7 783 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 PKN3Q6P5Z2 889 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 FAM171BQ6P995 826 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 SH3RF2Q8TEC5 729 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 MYLPFQ96A32 169 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 EDEM2Q9BV94 578 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 PDE11AQ9HCR9 933 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 LMBRD1Q9NUN5 540 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 WNT6Q9Y6F9 365 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 MYOFQ9NZM1 2061 aa14.27□□□□□ -0.13
TRAF4-214ENST00000580073 MAP1BP46821 2468 aaKnown RBP14.26□□□□□ -0.13
TRAF4-214ENST00000580073 GOLGA8IPA6NC78 632 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 OTOL1A6NHN0 477 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-214ENST00000580073 GOLGA8JA6NMD2 632 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 WARSP23381 471 aaKnown RBP14.26□□□□□ -0.13
TRAF4-214ENST00000580073 GRIK1P39086 918 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 DGKEP52429 567 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 SNRPFP62306 86 aaKnown RBP14.26□□□□□ -0.13
TRAF4-214ENST00000580073 TNNC1P63316 161 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 SHC2P98077 582 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 CYP27A1Q02318 531 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 CREB5Q02930 508 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 EHHADHQ08426 723 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 SOWAHAQ2M3V2 549 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 PREPLQ4J6C6 727 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-214ENST00000580073 DAB2IPQ5VWQ8 1189 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 ARL14EPQ8N8R7 260 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-214ENST00000580073 STKLD1Q8NE28 680 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 CHFRQ96EP1 664 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 SPACA7Q96KW9 195 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 SLITRK1Q96PX8 696 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 FNBP1Q96RU3 617 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 MMS19Q96T76 1030 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 ELOVL4Q9GZR5 314 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 SNX25Q9H3E2 840 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 PCIF1Q9H4Z3 704 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 GCNT4Q9P109 453 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 SIX4Q9UIU6 781 aa14.26□□□□□ -0.13
TRAF4-214ENST00000580073 KMT2BQ9UMN6 2715 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms