RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 KDELR1P24390 212 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 LRPAP1P30533 357 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 RFC1P35251 1148 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 FLT3P36888 993 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 ADCY8P40145 1251 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 C1QTNF8P60827 252 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 SREBF2Q12772 1141 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 SLC29A2Q14542 456 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 PTGISQ16647 500 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 CCDC142Q17RM4 750 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 ZC3H12AQ5D1E8 599 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 MFSD7Q6UXD7 560 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 PPP1R21Q6ZMI0 780 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 SCARA5Q6ZMJ2 495 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 RASAL3Q86YV0 1011 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 TOP6BLQ8N6T0 577 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 BCAS4Q8TDM0 211 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 C1orf54Q8WWF1 131 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 HHIPL1Q96JK4 782 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 TNIP3Q96KP6 325 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 CCDC114Q96M63 670 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 HEXIM2Q96MH2 286 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 CPXM1Q96SM3 734 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 HINFPQ9BQA5 517 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 TRIM31Q9BZY9 425 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 SDCBP2Q9H190 292 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 UPF3AQ9H1J1 476 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 CDC42EP4Q9H3Q1 356 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 SMYD3Q9H7B4 428 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 SLC38A7Q9NVC3 462 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 RCOR3Q9P2K3 495 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 CHORDC1Q9UHD1 332 aaPredicted RBP9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 TPX2Q9ULW0 747 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 POLIQ9UNA4 740 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 TRIP11Q15643 1979 aa9.3□□□□□ -0.92
PPP4R1-213ENST00000579609 C17orf102A2RUQ5 167 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 LRRD1A4D1F6 860 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 C2CD4BA6NLJ0 364 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 F8VP50 259 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 TRAPPC3O43617 180 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 DUSP11O75319 330 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 SPAG6O75602 509 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 NPTXRO95502 500 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 ZFXP17010 805 aaPredicted RBP9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 TGM2P21980 687 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 ZNF135P52742 658 aaPredicted RBP9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 NDST1P52848 882 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 ITGA8P53708 1063 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 BCAT1P54687 386 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 AIF1P55008 147 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 OSTNP61366 133 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 OGDHQ02218 1023 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 BST2Q10589 180 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 SNX17Q15036 470 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 PROX2Q3B8N5 592 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 FBXO47Q5MNV8 452 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 TMEM63BQ5T3F8 832 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 IZUMO3Q5VZ72 239 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 NUDT18Q6ZVK8 323 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 SLC26A9Q7LBE3 791 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 RSPH3Q86UC2 560 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 TAX1BP1Q86VP1 789 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 TMEM192Q8IY95 271 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 TMEM86AQ8N2M4 240 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 ANKRD52Q8NB46 1076 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 RTP4Q96DX8 246 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 CPB2Q96IY4 423 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 FAM84AQ96KN4 292 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 ZNF670Q9BS34 389 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 TRIM6Q9C030 488 aaPredicted RBP9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 SEMA4AQ9H3S1 761 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 ZNF408Q9H9D4 720 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 ZFYVE28Q9HCC9 887 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 SETD4Q9NVD3 440 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 TSPAN16Q9UKR8 245 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 NOVA2Q9UNW9 492 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 USTQ9Y2C2 406 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 PTPN22Q9Y2R2 807 aa9.29□□□□□ -0.92
PPP4R1-213ENST00000579609 A0A087WUV0 522 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 ERICH4A6NGS2 130 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 M0QZ92 97 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 NDUFAB1O14561 156 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 DYNC1LI2O43237 492 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 TRUB2O95900 331 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 ALDH1A1P00352 501 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 SLC10A3P09131 477 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 WARSP23381 471 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 SSR1P43307 286 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 KCNJ1P48048 391 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 TAF6P49848 677 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 RAB27AP51159 221 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 ARSEP51690 589 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 HUNKP57058 714 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 SLC8A3P57103 927 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 GJA9P57773 515 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 SLC6A3Q01959 620 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 XRCC4Q13426 336 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 TAF1CQ15572 869 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 KIZQ2M2Z5 673 aa9.28□□□□□ -0.92
PPP4R1-213ENST00000579609 ZNF394Q53GI3 561 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms