RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 ATP9BO43861 1147 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TSPAN3O60637 253 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 KRT38O76015 456 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ANXA9O76027 345 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 RASGRP1O95267 797 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SETSIPP0DME0 302 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 VDRP11473 427 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MSH3P20585 1137 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 AKAP5P24588 427 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 GTF2E2P29084 291 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ARRB1P49407 418 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PSEN1P49768 467 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ARL4CP56559 192 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MAP3K10Q02779 954 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PTPN11Q06124 597 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 GRIK3Q13003 919 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SEMA3FQ13275 785 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 HIC1Q14526 733 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 LLGL1Q15334 1064 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PCSK7Q16549 785 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 AMHR2Q16671 573 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MDH1BQ5I0G3 518 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 WDR45BQ5MNZ6 344 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TIGD7Q6NT04 549 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 CCDC121Q6ZUS5 278 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DENND5BQ6ZUT9 1274 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TBC1D1Q86TI0 1168 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 METTL3Q86U44 580 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 NPAS4Q8IUM7 802 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 COLGALT2Q8IYK4 626 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ABRAQ8N0Z2 381 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 KRT78Q8N1N4 520 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ANKRD42Q8N9B4 389 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SNX31Q8N9S9 440 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 HERVK_113Q902F9 699 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ATOH1Q92858 354 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TSPAN17Q96FV3 270 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SMARCD1Q96GM5 515 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 GDAP1L1Q96MZ0 367 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 NECTIN4Q96NY8 510 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PRPF18Q99633 342 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PI4K2AQ9BTU6 479 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 POLR3CQ9BUI4 534 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ASPSCR1Q9BZE9 553 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DPH5Q9H2P9 285 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 CYP3A43Q9HB55 503 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SUSD2Q9UGT4 822 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PTPN22Q9Y2R2 807 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 STARD13Q9Y3M8 1113 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DYRK1BQ9Y463 629 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PCDHB2Q9Y5E7 798 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 IQANK1A0A1B0GTG1 560 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 KPNA7A9QM74 516 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 GCATO75600 419 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 WEE2P0C1S8 567 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TRIM49P0CI25 452 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TRIM49CP0CI26 452 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 GFAPP14136 432 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PBLDP30039 288 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 CCR1P32246 355 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 RPL9P32969 192 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ROR1Q01973 937 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SP2Q02086 613 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SETMARQ53H47 684 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MOXD1Q6UVY6 613 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MMS22LQ6ZRQ5 1243 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ACOT1Q86TX2 421 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 RHOT1Q8IXI2 618 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 C4orf19Q8IY42 314 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 LEMD2Q8NC56 503 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 IRF7Q92985 503 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 HPS3Q969F9 1004 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 E2F7Q96AV8 911 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 KCNQ5Q9NR82 932 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TXLNGQ9NUQ3 528 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DNAJC11Q9NVH1 559 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DZANK1Q9NVP4 752 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 LIMA1Q9UHB6 759 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TEKT2Q9UIF3 430 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ITGA11Q9UKX5 1188 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SUFUQ9UMX1 484 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 CRYL1Q9Y2S2 319 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 HBS1LQ9Y450 684 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 EPN1Q9Y6I3 576 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SSC5DA1L4H1 1573 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 NEMP2A6NFY4 417 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 LRRC14BA6NHZ5 514 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ACKR2O00590 384 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ONECUT3O60422 494 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SUPT3HO75486 399 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 FGFR4P22455 802 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SERPINA4P29622 427 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 BLKP51451 505 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MAP3K7CLP57077 242 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 NCALDP61601 193 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SNRPD1P62314 119 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ZBED6P86452 979 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PTK7Q13308 1070 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 INSCQ1MX18 579 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ADCK5Q3MIX3 580 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms