RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 SETSIPP0DME0 302 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 CYP11B1P15538 503 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 TFF2Q03403 129 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 BST2Q10589 180 aaKnown RBP14.79□□□□□ -0.04
RPAIN-217ENST00000575711 TRIM14Q14142 442 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 PABPC1LQ4VXU2 614 aaKnown RBP14.79□□□□□ -0.04
RPAIN-217ENST00000575711 CYP4A22Q5TCH4 519 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 DENND5BQ6ZUT9 1274 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 TTC30AQ86WT1 665 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 VSTM4Q8IW00 320 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 NUP93Q8N1F7 819 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 LEMD2Q8NC56 503 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 ZMIZ2Q8NF64 920 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.79□□□□□ -0.04
RPAIN-217ENST00000575711 UBA3Q8TBC4 463 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 FEZF2Q8TBJ5 459 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 BAP1Q92560 729 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 ZSWIM1Q9BR11 485 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 CORO1BQ9BR76 489 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 PNPLA8Q9NP80 782 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 HCFC1R1Q9NWW0 138 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 DNMT3BQ9UBC3 853 aaKnown RBP14.79□□□□□ -0.04
RPAIN-217ENST00000575711 MAGED2Q9UNF1 606 aaPredicted RBP14.79□□□□□ -0.04
RPAIN-217ENST00000575711 REV3LO60673 3130 aa14.79□□□□□ -0.04
RPAIN-217ENST00000575711 GRXCR2A6NFK2 248 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 LRRC53A6NM62 1247 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
RPAIN-217ENST00000575711 TPM1P09493 284 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 FERP16591 822 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 SSTR3P32745 418 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-217ENST00000575711 KRT9P35527 623 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 ZNF75DP51815 510 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 ARID5AQ03989 594 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 CBX2Q14781 532 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-217ENST00000575711 MEA1Q16626 185 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 PTCRAQ6ISU1 281 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-217ENST00000575711 PDZD4Q76G19 769 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-217ENST00000575711 HS6ST3Q8IZP7 471 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 STKLD1Q8NE28 680 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 EPS8L1Q8TE68 723 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 CPLX3Q8WVH0 158 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 SUSD6Q92537 303 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 MRFAP1L1Q96HT8 127 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 NUCKS1Q9H1E3 243 aaKnown RBP14.78□□□□□ -0.04
RPAIN-217ENST00000575711 PDCL3Q9H2J4 239 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 WDR6Q9NNW5 1121 aaKnown RBP14.78□□□□□ -0.04
RPAIN-217ENST00000575711 UXTQ9UBK9 157 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-217ENST00000575711 CDH22Q9UJ99 828 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 CAPN11Q9UMQ6 739 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 CEP83Q9Y592 693 aa14.78□□□□□ -0.04
RPAIN-217ENST00000575711 CLUHO75153 1309 aa14.77□□□□□ -0.04
RPAIN-217ENST00000575711 ZNF197O14709 1029 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 RTN3O95197 1032 aaPredicted RBP14.77□□□□□ -0.05
RPAIN-217ENST00000575711 FGF19O95750 216 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 GYPCP04921 128 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 MYL4P12829 197 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 HMGA1P17096 107 aaKnown RBP14.77□□□□□ -0.05
RPAIN-217ENST00000575711 SLC5A3P53794 718 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 EPHA5P54756 1037 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 NTHL1P78549 312 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 ZBED6P86452 979 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 PDE4CQ08493 712 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 MTMR3Q13615 1198 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 ASIC2Q16515 512 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 PKDCCQ504Y2 493 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 SFMBT2Q5VUG0 894 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 TAF3Q5VWG9 929 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 NOP9Q86U38 636 aaKnown RBP14.77□□□□□ -0.05
RPAIN-217ENST00000575711 PIGZQ86VD9 579 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 ZNF677Q86XU0 584 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 TMC8Q8IU68 726 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 GPIHBP1Q8IV16 184 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 ATXN2LQ8WWM7 1075 aaKnown RBP14.77□□□□□ -0.05
RPAIN-217ENST00000575711 SECISBP2LQ93073 1101 aaKnown RBP14.77□□□□□ -0.05
RPAIN-217ENST00000575711 TRMT2BQ96GJ1 504 aaKnown RBP14.77□□□□□ -0.05
RPAIN-217ENST00000575711 GCNAQ96QF7 691 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 UBXN6Q9BZV1 441 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 AVENQ9NQS1 362 aaPredicted RBP14.77□□□□□ -0.05
RPAIN-217ENST00000575711 COMMD8Q9NX08 183 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 PCDHGC3Q9UN70 934 aa14.77□□□□□ -0.05
RPAIN-217ENST00000575711 LUC7L2Q9Y383 392 aaKnown RBP14.77□□□□□ -0.05
RPAIN-217ENST00000575711 HHLA1C9JL84 531 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 TNFRSF10BO14763 440 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 FSHRP23945 695 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 CDC25CP30307 473 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 PLA2G4AP47712 749 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 MRPS5P82675 430 aaKnown RBP14.76□□□□□ -0.05
RPAIN-217ENST00000575711 IFRD2Q12894 506 aaPredicted RBP14.76□□□□□ -0.05
RPAIN-217ENST00000575711 DENND1BQ6P3S1 775 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 TMC6Q7Z403 805 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 MYRFLQ96LU7 910 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 TTLL2Q9BWV7 592 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 LHX5Q9H2C1 402 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 FBXO44Q9H4M3 255 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 POMKQ9H5K3 350 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 ZNF334Q9HCZ1 680 aaPredicted RBP14.76□□□□□ -0.05
RPAIN-217ENST00000575711 AIPL1Q9NZN9 384 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 MRPS23Q9Y3D9 190 aaKnown RBP14.76□□□□□ -0.05
RPAIN-217ENST00000575711 PTPRDP23468 1912 aa14.76□□□□□ -0.05
RPAIN-217ENST00000575711 GOLGA6L3A6NEY3 463 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms