RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 PDCL3Q9H2J4 239 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 ABHD10Q9NUJ1 306 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 EHD2Q9NZN4 543 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 LSM8O95777 96 aaKnown RBP18.06■□□□□ 0.48
NUP88-210ENST00000574867 GPR15P49685 360 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 ITIH3Q06033 890 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 PDE4CQ08493 712 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 KLHL30Q0D2K2 578 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 TAF3Q5VWG9 929 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 EP400NLQ6ZTU2 488 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 GPIHBP1Q8IV16 184 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 SLC20A1Q8WUM9 679 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 ANP32BQ92688 251 aaKnown RBP18.06■□□□□ 0.48
NUP88-210ENST00000574867 KCNK16Q96T55 309 aa18.06■□□□□ 0.48
NUP88-210ENST00000574867 ZNHIT6Q9NWK9 470 aaKnown RBP18.06■□□□□ 0.48
NUP88-210ENST00000574867 CCDC195A0A1B0GUA6 201 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 BEST1O76090 585 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 SERPING1P05155 500 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 CSH1P0DML2 217 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 CSH2P0DML3 217 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 LTBRP36941 435 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 PLA2G4AP47712 749 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 SYCE2Q6PIF2 218 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 TRIM72Q6ZMU5 477 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 DENND5BQ6ZUT9 1274 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
NUP88-210ENST00000574867 PPM1EQ8WY54 764 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 SECISBP2LQ93073 1101 aaKnown RBP18.05■□□□□ 0.48
NUP88-210ENST00000574867 PSMG2Q969U7 264 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 MSLNLQ96KJ4 702 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 UBE2ZQ9H832 354 aaPredicted RBP18.05■□□□□ 0.48
NUP88-210ENST00000574867 CCL16O15467 120 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 MMEP08473 750 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 GPD2P43304 727 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 ADKP55263 362 aaKnown RBP18.05■□□□□ 0.48
NUP88-210ENST00000574867 TAF12Q16514 161 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 TDRD12Q587J7 1177 aaKnown RBP18.05■□□□□ 0.48
NUP88-210ENST00000574867 DENND1BQ6P3S1 775 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 UBA3Q8TBC4 463 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 ZNF707Q96C28 371 aaPredicted RBP18.05■□□□□ 0.48
NUP88-210ENST00000574867 ZNF512Q96ME7 567 aaPredicted RBP18.05■□□□□ 0.48
NUP88-210ENST00000574867 NOX5Q96PH1 765 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 AGPAT1Q99943 283 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 HAUS4Q9H6D7 363 aa18.05■□□□□ 0.48
NUP88-210ENST00000574867 GREB1Q4ZG55 1949 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 RTN3O95197 1032 aaPredicted RBP18.04■□□□□ 0.48
NUP88-210ENST00000574867 SSTR3P32745 418 aaPredicted RBP18.04■□□□□ 0.48
NUP88-210ENST00000574867 CDH5P33151 784 aaPredicted RBP18.04■□□□□ 0.48
NUP88-210ENST00000574867 SLC5A3P53794 718 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 FMO1Q01740 532 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 DLX2Q07687 328 aaPredicted RBP18.04■□□□□ 0.48
NUP88-210ENST00000574867 RARS2Q5T160 578 aaKnown RBP18.04■□□□□ 0.48
NUP88-210ENST00000574867 SDHAF4Q5VUM1 108 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 HGSNATQ68CP4 663 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 TMC5Q6UXY8 1006 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 PIGZQ86VD9 579 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 NUP93Q8N1F7 819 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 C12orf76Q8N812 135 aaPredicted RBP18.04■□□□□ 0.48
NUP88-210ENST00000574867 TC2NQ8N9U0 490 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 LEMD2Q8NC56 503 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 TMEM35BQ8NCS4 154 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 STK32AQ8WU08 396 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 SLC35F5Q8WV83 523 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 SMG7Q92540 1137 aaKnown RBP18.04■□□□□ 0.48
NUP88-210ENST00000574867 TRMT2BQ96GJ1 504 aaKnown RBP18.04■□□□□ 0.48
NUP88-210ENST00000574867 ADAM7Q9H2U9 754 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 COMMD8Q9NX08 183 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 COG5Q9UP83 839 aa18.04■□□□□ 0.48
NUP88-210ENST00000574867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.03■□□□□ 0.48
NUP88-210ENST00000574867 SLC38A8A6NNN8 435 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 HHLA1C9JL84 531 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 CFHP08603 1231 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 CES5AQ6NT32 575 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 GPR149Q86SP6 731 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 PASD1Q8IV76 773 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 GIPC2Q8TF65 315 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 KCTD13Q8WZ19 329 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 HLA-CQ95604 372 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 HSFY1Q96LI6 401 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 SYT11Q9BT88 431 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 PIDD1Q9HB75 910 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 CYLDQ9NQC7 956 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 UXTQ9UBK9 157 aaPredicted RBP18.03■□□□□ 0.48
NUP88-210ENST00000574867 TNFRSF10BO14763 440 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 CHRNB2P17787 502 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 VPS36Q86VN1 386 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 SPC24Q8NBT2 197 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 SMRP1Q8NCR6 262 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 GPR152Q8TDT2 470 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 TTLL2Q9BWV7 592 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 FBXO44Q9H4M3 255 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 CD207Q9UJ71 328 aa18.03■□□□□ 0.48
NUP88-210ENST00000574867 C2orf16Q68DN1 1984 aa18.02■□□□□ 0.48
NUP88-210ENST00000574867 PTPN2P17706 415 aa18.02■□□□□ 0.48
NUP88-210ENST00000574867 PDCLQ13371 301 aa18.02■□□□□ 0.48
NUP88-210ENST00000574867 RAB41Q5JT25 222 aa18.02■□□□□ 0.48
NUP88-210ENST00000574867 DNAJB7Q7Z6W7 309 aaPredicted RBP18.02■□□□□ 0.48
NUP88-210ENST00000574867 C1orf131Q8NDD1 294 aaKnown RBP18.02■□□□□ 0.48
NUP88-210ENST00000574867 MYRFLQ96LU7 910 aa18.02■□□□□ 0.48
NUP88-210ENST00000574867 S1PR5Q9H228 398 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms