RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 TCF3P15923 654 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 HOXC13P31276 330 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 MPLP40238 635 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 RAP1GAPP47736 663 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 PPP3CCP48454 512 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 DMC1Q14565 340 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 SF3A2Q15428 464 aaKnown RBP13.01□□□□□ -0.33
CCDC40-210ENST00000573903 CCDC6Q16204 474 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 SNRNP35Q16560 246 aaKnown RBP13.01□□□□□ -0.33
CCDC40-210ENST00000573903 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 HS2ST1Q7LGA3 356 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 IQUBQ8NA54 791 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 KBTBD7Q8WVZ9 684 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 DHX58Q96C10 678 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 TRIM9Q9C026 710 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 FBRSL1Q9HCM7 1045 aaKnown RBP13.01□□□□□ -0.33
CCDC40-210ENST00000573903 GCNT4Q9P109 453 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 UBE4BO95155 1302 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
CCDC40-210ENST00000573903 SLC9A3R1O14745 358 aaPredicted RBP13□□□□□ -0.33
CCDC40-210ENST00000573903 PPP6R2O75170 966 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 ABL1P00519 1130 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 LMO2P25791 158 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 GBP1P32455 592 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 DGKEP52429 567 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 SNRPFP62306 86 aaKnown RBP13□□□□□ -0.33
CCDC40-210ENST00000573903 TRPC3Q13507 836 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 PKP1Q13835 747 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 MDH1BQ5I0G3 518 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 SCARA3Q6AZY7 606 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 C11orf74Q86VG3 221 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 RDH13Q8NBN7 331 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 LINC00301Q8NCQ3 95 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 GLIS3Q8NEA6 775 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 TSTD1Q8NFU3 115 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 OR6B3Q8NGW1 331 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 MYCBPAPQ8TBZ2 947 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 HPS3Q969F9 1004 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 PCED1BQ96HM7 432 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 CHAMP1Q96JM3 812 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 ZC3H10Q96K80 434 aaKnown RBP13□□□□□ -0.33
CCDC40-210ENST00000573903 SLITRK1Q96PX8 696 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 CGRRF1Q99675 332 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 ELOVL4Q9GZR5 314 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 MAGEF1Q9HAY2 307 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 CRTAC1Q9NQ79 661 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 VPS45Q9NRW7 570 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 KBTBD4Q9NVX7 518 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 CFAP45Q9UL16 551 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 ATP6V1DQ9Y5K8 247 aa13□□□□□ -0.33
CCDC40-210ENST00000573903 ATP8B3O60423 1300 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 LEFTY2O00292 366 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 TACC1O75410 805 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 GNL1P36915 607 aaPredicted RBP12.99□□□□□ -0.33
CCDC40-210ENST00000573903 CYP2J2P51589 502 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 NOP14P78316 857 aaKnown RBP12.99□□□□□ -0.33
CCDC40-210ENST00000573903 IFRD2Q12894 506 aaPredicted RBP12.99□□□□□ -0.33
CCDC40-210ENST00000573903 PSMD6Q15008 389 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
CCDC40-210ENST00000573903 PLK5Q496M5 336 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 TDRD10Q5VZ19 366 aaKnown RBP12.99□□□□□ -0.33
CCDC40-210ENST00000573903 NAIF1Q69YI7 327 aaPredicted RBP12.99□□□□□ -0.33
CCDC40-210ENST00000573903 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
CCDC40-210ENST00000573903 LIMS2Q7Z4I7 341 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC40-210ENST00000573903 XXYLT1Q8NBI6 393 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 ZNF507Q8TCN5 953 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 CCDC127Q96BQ5 260 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 C8orf48Q96LL4 319 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 TTLL2Q9BWV7 592 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 AGPAT3Q9NRZ7 376 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 EBF1Q9UH73 591 aa12.99□□□□□ -0.33
CCDC40-210ENST00000573903 NCOR2Q9Y618 2525 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 A8MXQ7 604 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 F8VP50 259 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 CLIC2O15247 247 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 CUTAO60888 179 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 PHACTR2O75167 634 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 FAM163BP0C2L3 166 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 SEC13P55735 322 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 SLC7A9P82251 487 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 CREB5Q02930 508 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 E2F4Q16254 413 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 WDR72Q3MJ13 1102 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 USP39Q53GS9 565 aaKnown RBP12.98□□□□□ -0.33
CCDC40-210ENST00000573903 PLA2G2CQ5R387 149 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 STPG1Q5TH74 334 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 RNF43Q68DV7 783 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 UNC13DQ70J99 1090 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 NELFCDQ8IXH7 590 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 KIAA1958Q8N8K9 716 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
CCDC40-210ENST00000573903 MRPL45Q9BRJ2 306 aaKnown RBP12.98□□□□□ -0.33
CCDC40-210ENST00000573903 DUSP15Q9H1R2 295 aaPredicted RBP12.98□□□□□ -0.33
CCDC40-210ENST00000573903 LINC00597Q9H2U6 94 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 POLR3BQ9NW08 1133 aaPredicted RBP12.98□□□□□ -0.33
CCDC40-210ENST00000573903 CGNQ9P2M7 1197 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms