RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 BACE1P56817 501 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 EIF3EP60228 445 aaKnown RBP19.94■□□□□ 0.78
SCARF1-206ENST00000573852 FAAP100Q0VG06 881 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 PTK7Q13308 1070 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 HADHQ16836 314 aaKnown RBP19.94■□□□□ 0.78
SCARF1-206ENST00000573852 SH2D5Q6ZV89 423 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 APBB1IPQ7Z5R6 666 aaPredicted RBP19.94■□□□□ 0.78
SCARF1-206ENST00000573852 RFX6Q8HWS3 928 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 THNSL1Q8IYQ7 743 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 SKA1Q96BD8 255 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 NSL1Q96IY1 281 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 NIFKQ9BYG3 293 aaKnown RBP19.94■□□□□ 0.78
SCARF1-206ENST00000573852 STRIP2Q9ULQ0 834 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 BGNP21810 368 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 GCKP35557 465 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 PSMC1P62191 440 aaKnown RBP19.94■□□□□ 0.78
SCARF1-206ENST00000573852 PRKD1Q15139 912 aaPredicted RBP19.94■□□□□ 0.78
SCARF1-206ENST00000573852 KBTBD12Q3ZCT8 623 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 TCRBV9S1A1TA0A576 114 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 DLDP09622 509 aaKnown RBP19.93■□□□□ 0.78
SCARF1-206ENST00000573852 TRPC3Q13507 836 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 DUOXA2Q1HG44 320 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 KCTD6Q8NC69 237 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 TTC17Q96AE7 1141 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 CLGNO14967 610 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 MSCO60682 206 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 LMNAP02545 664 aaKnown RBP19.93■□□□□ 0.78
SCARF1-206ENST00000573852 PDHA1P08559 390 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 RBP3P10745 1247 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 PYGBP11216 843 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 CD19P15391 556 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 SESN3P58005 492 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 TFAMQ00059 246 aaKnown RBP19.93■□□□□ 0.78
SCARF1-206ENST00000573852 CDK16Q00536 496 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 GRIK3Q13003 919 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 CMPK2Q5EBM0 449 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 ZPBP2Q6X784 338 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 RINLQ6ZS11 566 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 CHSY1Q86X52 802 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 NIM1KQ8IY84 436 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 CPXM1Q96SM3 734 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 XYLT2Q9H1B5 865 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 METTL5Q9NRN9 209 aaKnown RBP19.93■□□□□ 0.78
SCARF1-206ENST00000573852 POLIQ9UNA4 740 aa19.93■□□□□ 0.78
SCARF1-206ENST00000573852 IQANK1A0A1B0GTG1 560 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 KBTBD13C9JR72 458 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 APOC4-APOC2K7ER74 178 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 APOC2P02655 101 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 HSPA1LP34931 641 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 RAP1GAPP47736 663 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 YWHAEP62258 255 aaKnown RBP19.92■□□□□ 0.78
SCARF1-206ENST00000573852 ZBTB16Q05516 673 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 SLC18A2Q05940 514 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 ZNF699Q32M78 642 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 NPNTQ6UXI9 565 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 TTC7BQ86TV6 843 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 SLC44A1Q8WWI5 657 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 PRPF31Q8WWY3 499 aaKnown RBP19.92■□□□□ 0.78
SCARF1-206ENST00000573852 DNAJC9Q8WXX5 260 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 HSPH1Q92598 858 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 APOPT1Q96IL0 206 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 PCYT2Q99447 389 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 GYG2O15488 501 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 DNAJC6O75061 913 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 TOM1L1O75674 476 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 TSHRP16473 764 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 POLR2BP30876 1174 aaKnown RBP19.92■□□□□ 0.78
SCARF1-206ENST00000573852 GRM1Q13255 1194 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 ORC1Q13415 861 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 KPNB1Q14974 876 aaKnown RBP19.92■□□□□ 0.78
SCARF1-206ENST00000573852 ACSBG2Q5FVE4 666 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 LBHD1Q9BQE6 289 aaPredicted RBP19.92■□□□□ 0.78
SCARF1-206ENST00000573852 NXF1Q9UBU9 619 aaKnown RBP19.92■□□□□ 0.78
SCARF1-206ENST00000573852 ADAMTS5Q9UNA0 930 aa19.92■□□□□ 0.78
SCARF1-206ENST00000573852 MTO1Q9Y2Z2 717 aaKnown RBP19.92■□□□□ 0.78
SCARF1-206ENST00000573852 DPPA5A6NC42 116 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 AVILO75366 819 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 MIPP30301 263 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 HMGCS2P54868 508 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 ZNF200P98182 395 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-206ENST00000573852 TARBP2Q15633 366 aaKnown RBP19.91■□□□□ 0.78
SCARF1-206ENST00000573852 NAIF1Q69YI7 327 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-206ENST00000573852 XYLT1Q86Y38 959 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 CMASQ8NFW8 434 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-206ENST00000573852 SPATA18Q8TC71 538 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 FNIP1Q8TF40 1166 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 TUBB6Q9BUF5 446 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 CALN1Q9BXU9 219 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 ACAD9Q9H845 621 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 CNTN3Q9P232 1028 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 TEX264Q9Y6I9 313 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 MCF2LO15068 1137 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 KRT36O76013 467 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 TGDSO95455 350 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 ERBB2P04626 1255 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 NEFHP12036 1026 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 ACADSP16219 412 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 OAZ1P54368 228 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 MMRN1Q13201 1228 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 RCN1Q15293 331 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms