RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 AURKAO14965 403 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 ATXN7O15265 892 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 TP73O15350 636 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 NPHS1O60500 1241 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 GUCY1B2O75343 617 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 BCAS2O75934 225 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 GCNT3O95395 438 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 FTCDO95954 541 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 PAHP00439 452 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 AMY2AP04746 511 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 TPOP07202 933 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 TMEM253P0C7T8 217 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 PLS3P13797 630 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 EIF2AK2P19525 551 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 AMY2BP19961 511 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 CCNA2P20248 432 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 EPHA8P29322 1005 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 HOXC8P31273 242 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 MCM7P33993 719 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 FNTBP49356 437 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 ARL4DP49703 201 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 HSD17B4P51659 736 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 LGALS4P56470 323 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 ACTR1AP61163 376 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 SCN1BQ07699 218 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 AIMP2Q13155 320 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 DCTN2Q13561 401 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 NEUROD1Q13562 356 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 CAMK1Q14012 370 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 ADRM1Q16186 407 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 NTRK2Q16620 822 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 MAPKAPK3Q16644 382 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 IMMTQ16891 758 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 AMOTQ4VCS5 1084 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 C9orf152Q5JTZ5 239 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 HP1BP3Q5SSJ5 553 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 C12orf60Q5U649 245 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 ANO7Q6IWH7 933 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 USP17L6PQ6QN14 398 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 PRICKLE2Q7Z3G6 844 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 SPATA2LQ8IUW3 424 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 PHYKPLQ8IUZ5 450 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 TMEM151BQ8IW70 566 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 MYOCDQ8IZQ8 938 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 DCLK2Q8N568 766 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 SH2D3CQ8N5H7 860 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 VGLL2Q8N8G2 317 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 RTL3Q8N8U3 475 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 OR6C4Q8NGE1 309 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 OR56B2PQ8NGI1 322 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 OR52K1Q8NGK4 314 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 OR6B3Q8NGW1 331 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 RFWD2Q8NHY2 731 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 CCDC110Q8TBZ0 833 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 SLC5A11Q8WWX8 675 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 NAF1Q96HR8 494 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 CTAGE1Q96RT6 745 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 KCNJ15Q99712 375 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 ADI1Q9BV57 179 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 ASPNQ9BXN1 380 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 OSBPL6Q9BZF3 934 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 LRRCC1Q9C099 1032 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 SLC7A5P2Q9GIP4 190 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 NYXQ9GZU5 481 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 PRDM14Q9GZV8 571 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 AP5M1Q9H0R1 490 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 TP63Q9H3D4 680 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 SEMA4AQ9H3S1 761 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 DNAJC18Q9H819 358 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 TRPV5Q9NQA5 729 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 G6PC2Q9NQR9 355 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 SH2B1Q9NRF2 756 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 SERINC1Q9NRX5 453 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 GFOD1Q9NXC2 390 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 MTUS1Q9ULD2 1270 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 HSF4Q9ULV5 492 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 BTBD3Q9Y2F9 522 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 PCDHA3Q9Y5H8 950 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 PCDHA2Q9Y5H9 948 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 POMT1Q9Y6A1 747 aa5.34□□□□□ -1.55
TOPBP1-210ENST00000572787 TTC21BQ7Z4L5 1316 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 ST20-MTHFSA0A0A6YYL1 179 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 TRAV34A0A0B4J273 112 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 A0A1W2PRV1 198 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 A4D1N5 150 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CTAGE15A4D2H0 777 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 LRRIQ4A6NIV6 560 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 H7BY64 318 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 SCDO00767 359 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 TSPAN4O14817 238 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 MAGEB3O15480 346 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 MYO1BO43795 1136 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 ENTPD3O75355 529 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 SLITRK3O94933 977 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 REC8O95072 547 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 EPN2O95208 641 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 GLP2RO95838 553 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 IFNB1P01574 187 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CTAGE8P0CG41 777 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CKBP12277 381 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms