RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 DMWDQ09019 674 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 TMEM196Q5HYL7 178 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 B3GALNT2Q8NCR0 500 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 TMEM174Q8WUU8 243 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 SECISBP2LQ93073 1101 aaKnown RBP18.47■□□□□ 0.55
LITAF-211ENST00000572255 C8orf48Q96LL4 319 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 TTLL2Q9BWV7 592 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 ZNF518BQ9C0D4 1074 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 SMYD3Q9H7B4 428 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 VRTNQ9H8Y1 702 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 C2orf42Q9NWW7 574 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 EHD2Q9NZN4 543 aa18.47■□□□□ 0.55
LITAF-211ENST00000572255 TRDMT1O14717 391 aaKnown RBP18.46■□□□□ 0.55
LITAF-211ENST00000572255 CLSTN1O94985 981 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 C4BPAP04003 597 aaKnown RBP18.46■□□□□ 0.55
LITAF-211ENST00000572255 NR3C1P04150 777 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 RPN1P04843 607 aaKnown RBP18.46■□□□□ 0.55
LITAF-211ENST00000572255 HDCP19113 662 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 SYKP43405 635 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 NDUFA8P51970 172 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 CACNA2D1P54289 1103 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 NOP14P78316 857 aaKnown RBP18.46■□□□□ 0.55
LITAF-211ENST00000572255 AMPD2Q01433 879 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 GRSF1Q12849 480 aaKnown RBP eCLIP18.46■□□□□ 0.55
LITAF-211ENST00000572255 NCOA4Q13772 614 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 ZNF699Q32M78 642 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 FSTL4Q6MZW2 842 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 CPA6Q8N4T0 437 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 SH3RF2Q8TEC5 729 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 OSCP1Q8WVF1 389 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 RMDN1Q96DB5 314 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 B3GNT5Q9BYG0 378 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 ELOVL4Q9GZR5 314 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 TMEM30AQ9NV96 361 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 DUS2Q9NX74 493 aaKnown RBP18.46■□□□□ 0.55
LITAF-211ENST00000572255 TRPM5Q9NZQ8 1165 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 ARHGAP26Q9UNA1 814 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 WNT6Q9Y6F9 365 aa18.46■□□□□ 0.55
LITAF-211ENST00000572255 FAM237AA0A1B0GTK4 181 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 CLDN5O00501 218 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 VNN1O95497 513 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 TCF3P15923 654 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 RAP1GAPP47736 663 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 IFNAR2P48551 515 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 PDE6CP51160 858 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 CDH8P55286 799 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 DLG4P78352 724 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 ZNF667Q5HYK9 610 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 HEATR6Q6AI08 1181 aaKnown RBP18.45■□□□□ 0.54
LITAF-211ENST00000572255 SCARA5Q6ZMJ2 495 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 LONP2Q86WA8 852 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 ATP2A3Q93084 1043 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 ELMO3Q96BJ8 720 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 ECT2Q9H8V3 914 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 RAB23Q9ULC3 237 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 ATG2BQ96BY7 2078 aa18.45■□□□□ 0.54
LITAF-211ENST00000572255 ZNF840PA6NDX5 716 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 PRR29P0C7W0 189 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 PFKLP17858 780 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 GJA4P35212 333 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 LPAL2Q16609 132 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 EML3Q32P44 896 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 NAIF1Q69YI7 327 aaPredicted RBP18.44■□□□□ 0.54
LITAF-211ENST00000572255 PKN3Q6P5Z2 889 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 ERMP1Q7Z2K6 904 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 GPR161Q8N6U8 529 aaKnown RBP18.44■□□□□ 0.54
LITAF-211ENST00000572255 TMC2Q8TDI7 906 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 CCDC47Q96A33 483 aaKnown RBP18.44■□□□□ 0.54
LITAF-211ENST00000572255 SCAND2PQ9GZW5 306 aaPredicted RBP18.44■□□□□ 0.54
LITAF-211ENST00000572255 SDCBP2Q9H190 292 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 FBRSL1Q9HCM7 1045 aaKnown RBP18.44■□□□□ 0.54
LITAF-211ENST00000572255 GMEB2Q9UKD1 530 aa18.44■□□□□ 0.54
LITAF-211ENST00000572255 HRO43593 1189 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 RHOBTB3O94955 611 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 EGFP01133 1207 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 HOXA6P31267 233 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 HOXC13P31276 330 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 PPP3CCP48454 512 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 GALK1P51570 392 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 FOXK2Q01167 660 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 TAF10Q12962 218 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 ZACNQ401N2 412 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 CEP135Q66GS9 1140 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 LAIR1Q6GTX8 287 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 PRR23BQ6ZRT6 265 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 P2RY13Q9BPV8 354 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 FRMD4BQ9Y2L6 1034 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 ATP6V1DQ9Y5K8 247 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 ATP8B3O60423 1300 aa18.43■□□□□ 0.54
LITAF-211ENST00000572255 A0A1W2PQ27 194 aa18.42■□□□□ 0.54
LITAF-211ENST00000572255 A0A1W2PQ64 194 aa18.42■□□□□ 0.54
LITAF-211ENST00000572255 A0A1W2PQD8 194 aa18.42■□□□□ 0.54
LITAF-211ENST00000572255 CALUO43852 315 aaPredicted RBP18.42■□□□□ 0.54
LITAF-211ENST00000572255 RNF40O75150 1001 aa18.42■□□□□ 0.54
LITAF-211ENST00000572255 KIF20AO95235 890 aa18.42■□□□□ 0.54
LITAF-211ENST00000572255 ABL1P00519 1130 aa18.42■□□□□ 0.54
LITAF-211ENST00000572255 P4HA1P13674 534 aa18.42■□□□□ 0.54
LITAF-211ENST00000572255 DRD1P21728 446 aa18.42■□□□□ 0.54
LITAF-211ENST00000572255 CNR2P34972 360 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms