RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 UBALD2Q8IYN6 164 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 NUP93Q8N1F7 819 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 SLC44A3Q8N4M1 653 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 ZSCAN18Q8TBC5 510 aaPredicted RBP17.14■□□□□ 0.33
LITAF-210ENST00000571976 RSAD2Q8WXG1 361 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 EDAQ92838 391 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 FGF14Q92915 247 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 SMARCD2Q92925 531 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 ZSWIM3Q96MP5 696 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 KREMEN1Q96MU8 473 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 ASB16Q96NS5 453 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 SMOQ99835 787 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 TASP1Q9H6P5 420 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 TAB2Q9NYJ8 693 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
LITAF-210ENST00000571976 ECI2O75521 394 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 BEST1O76090 585 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 RTN3O95197 1032 aaPredicted RBP17.13■□□□□ 0.33
LITAF-210ENST00000571976 VDRP11473 427 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 ZNF18P17022 549 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
LITAF-210ENST00000571976 DDX6P26196 483 aaKnown RBP eCLIP17.13■□□□□ 0.33
LITAF-210ENST00000571976 PPP3CCP48454 512 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 MAP3K7CLP57077 242 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 ZXDAP98168 799 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 CYP4F8P98187 520 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 SMYD5Q6GMV2 418 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 MRPS31Q92665 395 aaKnown RBP17.13■□□□□ 0.33
LITAF-210ENST00000571976 DUSP16Q9BY84 665 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 VPS16Q9H269 839 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 EPHX3Q9H6B9 360 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 TRPV4Q9HBA0 871 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 ZFP14Q9HCL3 533 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 COMMD8Q9NX08 183 aa17.13■□□□□ 0.33
LITAF-210ENST00000571976 LIMA1Q9UHB6 759 aaKnown RBP17.13■□□□□ 0.33
LITAF-210ENST00000571976 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 LRRC10BA6NIK2 292 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 TNFRSF10BO14763 440 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 CD19P15391 556 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 NPR3P17342 541 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 YWHAQP27348 245 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 WEE1P30291 646 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 USP46P62068 366 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 ZSCAN23Q3MJ62 389 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 SGO2Q562F6 1265 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 STXBP5Q5T5C0 1151 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 TANGO2Q6ICL3 276 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 CLEC20AQ6ZU45 233 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 ANKRD52Q8NB46 1076 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 RBBP8NLQ8NC74 664 aaPredicted RBP17.12■□□□□ 0.33
LITAF-210ENST00000571976 ZMIZ2Q8NF64 920 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
LITAF-210ENST00000571976 ELSPBP1Q96BH3 223 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 RPP25Q9BUL9 199 aaKnown RBP17.12■□□□□ 0.33
LITAF-210ENST00000571976 PNPLA8Q9NP80 782 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 TRPM5Q9NZQ8 1165 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 CNTN6Q9UQ52 1028 aa17.12■□□□□ 0.33
LITAF-210ENST00000571976 RNF225M0QZC1 329 aaPredicted RBP17.11■□□□□ 0.33
LITAF-210ENST00000571976 CAVIN2O95810 425 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 FCARP24071 287 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 COPB1P53618 953 aaKnown RBP17.11■□□□□ 0.33
LITAF-210ENST00000571976 SLC5A3P53794 718 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 SLC8A3P57103 927 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 KCNMA1Q12791 1236 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 FKBP15Q5T1M5 1219 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 GJB7Q6PEY0 223 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 MON1AQ86VX9 555 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 ARID3BQ8IVW6 561 aaPredicted RBP17.11■□□□□ 0.33
LITAF-210ENST00000571976 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
LITAF-210ENST00000571976 E2F7Q96AV8 911 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 SLITRK1Q96PX8 696 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 SLC46A2Q9BY10 475 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 UBXN6Q9BZV1 441 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 HSD3B7Q9H2F3 369 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 SIX2Q9NPC8 291 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 IL37Q9NZH6 218 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 HESX1Q9UBX0 185 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 DUSP12Q9UNI6 340 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 GREB1Q4ZG55 1949 aa17.11■□□□□ 0.33
LITAF-210ENST00000571976 BECN2A8MW95 431 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 O00370 1275 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 TADA3O75528 432 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 KRT5P13647 590 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 ZNF132P52740 706 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 APBA1Q02410 837 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 TAF10Q12962 218 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 STILQ15468 1287 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 ARHGAP44Q17R89 818 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 GOLGA7BQ2TAP0 167 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 CMTM8Q8IZV2 173 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 MAB21L3Q8N8X9 362 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 PDZD8Q8NEN9 1154 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 SCAMP5Q8TAC9 235 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 OVCA2Q8WZ82 227 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 KXD1Q9BQD3 176 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 TSPAN16Q9UKR8 245 aa17.1■□□□□ 0.33
LITAF-210ENST00000571976 FAM92AA1XBS5 289 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms