RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 HHIPL2Q6UWX4 724 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 CRLF3Q8IUI8 442 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 MAP4K3Q8IVH8 894 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 TEKT1Q969V4 418 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 SRPK1Q96SB4 655 aaKnown RBP16.09■□□□□ 0.17
SMG6-207ENST00000570756 CCDC106Q9BWC9 280 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 G3BP2Q9UN86 482 aaKnown RBP16.09■□□□□ 0.17
SMG6-207ENST00000570756 IVNS1ABPQ9Y6Y0 642 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 CSDE1O75534 798 aaKnown RBP16.09■□□□□ 0.17
SMG6-207ENST00000570756 SPAG6O75602 509 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 ITGA2BP08514 1039 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 MMP10P09238 476 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 VCLP18206 1134 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 CHN2P52757 468 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 GAD2Q05329 585 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 SH2D5Q6ZV89 423 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 SLC25A41Q8N5S1 370 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 E2F7Q96AV8 911 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 RBM17Q96I25 401 aaKnown RBP16.09■□□□□ 0.17
SMG6-207ENST00000570756 MPP4Q96JB8 637 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 ACAP3Q96P50 834 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 WDR83Q9BRX9 315 aaKnown RBP16.09■□□□□ 0.17
SMG6-207ENST00000570756 ETNK2Q9NVF9 386 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 DCAF8L1A6NGE4 600 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 ARHGAP42A6NI28 874 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 BBOX1O75936 387 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 CCDC166P0CW27 439 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 CCNFP41002 786 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 CDKN2BP42772 138 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 SCNN1DP51172 638 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 USP46P62068 366 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 FAAP100Q0VG06 881 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 BST1Q10588 318 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 BRDTQ58F21 947 aaPredicted RBP16.08■□□□□ 0.17
SMG6-207ENST00000570756 SATL1Q86VE3 508 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 TTC13Q8NBP0 860 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 RAB3IL1Q8TBN0 382 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 RSAD2Q8WXG1 361 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 POMGNT1Q8WZA1 660 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 RILPQ96NA2 401 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 COA1Q9GZY4 146 aa16.08■□□□□ 0.17
SMG6-207ENST00000570756 XPO7Q9UIA9 1087 aaKnown RBP16.08■□□□□ 0.17
SMG6-207ENST00000570756 AP1G1O43747 822 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 PFDN1O60925 122 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 GNA15P30679 374 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.16
SMG6-207ENST00000570756 STAT2P52630 851 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 ALDH18A1P54886 795 aaKnown RBP16.08■□□□□ 0.16
SMG6-207ENST00000570756 AQP5P55064 265 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 PDK3Q15120 406 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 ABCB5Q2M3G0 1257 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 ANKRD20A4Q4UJ75 823 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 SFT2D3Q587I9 215 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 CERS5Q8N5B7 392 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 GSTCDQ8NEC7 633 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 ZNRF3Q9ULT6 936 aa16.08■□□□□ 0.16
SMG6-207ENST00000570756 MYH9P35579 1960 aaKnown RBP16.08■□□□□ 0.16
SMG6-207ENST00000570756 A0A088AWK7 358 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 TMEM191CA6NGB0 347 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 ZSCAN9O15535 394 aaPredicted RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 TMEM191BP0C7N4 346 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 TCF4P15884 667 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 DESP17661 470 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 AOC1P19801 751 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 GRIA2P42262 883 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 TTC39BQ5VTQ0 682 aaPredicted RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 APOBEC3HQ6NTF7 200 aaKnown RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 TATDN1Q6P1N9 297 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 ZFPM1Q8IX07 1006 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 PYDC1Q8WXC3 89 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 NMD3Q96D46 503 aaKnown RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 BTBD9Q96Q07 612 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 MXRA8Q9BRK3 442 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 SUDS3Q9H7L9 328 aaPredicted RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 AGTPBP1Q9UPW5 1226 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 CHMP2BQ9UQN3 213 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 SMCHD1A6NHR9 2005 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 TCRBV9S1A1TA0A576 114 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 PRR5-ARHGAP8B1AHC4 643 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 BTBD19C9JJ37 291 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 ZNF862O60290 1169 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 KRT37O76014 449 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 LYPLA2O95372 231 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 SERPINB2P05120 415 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 YWHABP31946 246 aaKnown RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 AQP4P55087 323 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 PSMC5P62195 406 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 RPL7AP62424 266 aaKnown RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 ARHGAP8P85298 464 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 DMP1Q13316 513 aaPredicted RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 LRRC36Q1X8D7 754 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 KBTBD12Q3ZCT8 623 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 TBC1D10BQ4KMP7 808 aaPredicted RBP16.07■□□□□ 0.16
SMG6-207ENST00000570756 FAM102BQ5T8I3 360 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 KLC3Q6P597 504 aa16.07■□□□□ 0.16
SMG6-207ENST00000570756 GPD1LQ8N335 351 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms