RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 UAP1L1Q3KQV9 507 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 TPGS2Q68CL5 300 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 PMS2CLQ68D20 193 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 C11orf74Q86VG3 221 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 C4orf19Q8IY42 314 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 TTC8Q8TAM2 541 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 SHKBP1Q8TBC3 707 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 ETNPPLQ8TBG4 499 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 MEGF10Q96KG7 1140 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 YTHDC1Q96MU7 727 aaKnown RBP6.46□□□□□ -1.38
CDH13-212ENST00000569144 UROC1Q96N76 676 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 TMEM209Q96SK2 561 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 XPNPEP1Q9NQW7 623 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 OBP2AQ9NY56 170 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 SNTG2Q9NY99 539 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 GTSE1Q9NYZ3 720 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 CEP72Q9P209 647 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 WRAP73Q9P2S5 460 aaPredicted RBP6.46□□□□□ -1.38
CDH13-212ENST00000569144 EBF1Q9UH73 591 aa6.46□□□□□ -1.38
CDH13-212ENST00000569144 EVLQ9UI08 416 aaPredicted RBP6.46□□□□□ -1.38
CDH13-212ENST00000569144 VWA8A3KMH1 1905 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 CCDC194A0A1B0GVG4 234 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 SPAARA0A1B0GVQ0 90 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 PATE3B3GLJ2 98 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 H7C4K7 107 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 SLC27A2O14975 620 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 DCLK1O15075 740 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 MEFVO15553 781 aaPredicted RBP6.45□□□□□ -1.38
CDH13-212ENST00000569144 RECQL4O94761 1208 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 TDP2O95551 362 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 APBB3O95704 486 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 B3GALT4O96024 378 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 IGFBP6P24592 240 aaPredicted RBP6.45□□□□□ -1.38
CDH13-212ENST00000569144 YWHABP31946 246 aaKnown RBP6.45□□□□□ -1.38
CDH13-212ENST00000569144 GBP1P32455 592 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 BRCC3P46736 316 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 CLCNKBP51801 687 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 IRX4P78413 519 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 TWF1Q12792 350 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 GRSF1Q12849 480 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDH13-212ENST00000569144 PPP2R5CQ13362 524 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 PTPAQ15257 358 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 ITPRIPL2Q3MIP1 535 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 XKR9Q5GH70 373 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 TMEM196Q5HYL7 178 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 RPS26P11Q5JNZ5 115 aaPredicted RBP6.45□□□□□ -1.38
CDH13-212ENST00000569144 TTC22Q5TAA0 569 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 FSTL4Q6MZW2 842 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 MOXD1Q6UVY6 613 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 CD300LGQ6UXG3 332 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 OTUD6AQ7L8S5 288 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 PIP4P1Q86T03 277 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 ARID3BQ8IVW6 561 aaPredicted RBP6.45□□□□□ -1.38
CDH13-212ENST00000569144 CHCHD4Q8N4Q1 142 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 CCDC148Q8NFR7 591 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 TBCKQ8TEA7 893 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 TP53INP1Q96A56 240 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 ZFYVE19Q96K21 471 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 RUSC1Q9BVN2 902 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 C22orf23Q9BZE7 217 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 RWDD1Q9H446 243 aaPredicted RBP6.45□□□□□ -1.38
CDH13-212ENST00000569144 CCDC86Q9H6F5 360 aaKnown RBP6.45□□□□□ -1.38
CDH13-212ENST00000569144 AFF4Q9UHB7 1163 aaKnown RBP6.45□□□□□ -1.38
CDH13-212ENST00000569144 TPCN1Q9ULQ1 816 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 MAFFQ9ULX9 164 aa6.45□□□□□ -1.38
CDH13-212ENST00000569144 LOC100289279A0A1B0GTE1 492 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 CCDC196A0A1B0GTZ2 297 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 CYSRT1A8MQ03 144 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 I3L4J1 428 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 TRDMT1O14717 391 aaKnown RBP6.44□□□□□ -1.38
CDH13-212ENST00000569144 SYN3O14994 580 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 N4BP3O15049 544 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 TBX3O15119 743 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 PRPF3O43395 683 aaKnown RBP6.44□□□□□ -1.38
CDH13-212ENST00000569144 PRPF40AO75400 957 aaKnown RBP6.44□□□□□ -1.38
CDH13-212ENST00000569144 GLRA2P23416 452 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 ARL2P36404 184 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 ARPP19P56211 112 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 TNK2Q07912 1038 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 SEMA3BQ13214 749 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 MRPL58Q14197 206 aaKnown RBP6.44□□□□□ -1.38
CDH13-212ENST00000569144 UPP1Q16831 310 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 CREB3L3Q68CJ9 461 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 Q6ZS46 218 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 SYT13Q7L8C5 426 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 TMC8Q8IU68 726 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 C3orf58Q8NDZ4 430 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 BPIFB1Q8TDL5 484 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 HNRNPLLQ8WVV9 542 aaKnown RBP6.44□□□□□ -1.38
CDH13-212ENST00000569144 LRIG1Q96JA1 1093 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 LRRC3BQ96PB8 259 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 PPP1R10Q96QC0 940 aaKnown RBP6.44□□□□□ -1.38
CDH13-212ENST00000569144 LXNQ9BS40 222 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 SSBP4Q9BWG4 385 aaPredicted RBP6.44□□□□□ -1.38
CDH13-212ENST00000569144 NUSAP1Q9BXS6 441 aaKnown RBP6.44□□□□□ -1.38
CDH13-212ENST00000569144 LRRC3Q9BY71 257 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 CXCL16Q9H2A7 254 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 PDZD7Q9H5P4 517 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 ZFYVE1Q9HBF4 777 aa6.44□□□□□ -1.38
CDH13-212ENST00000569144 PRMT7Q9NVM4 692 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms