RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 CHP1Q99653 195 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 BAG1Q99933 345 aaPredicted RBP11.06□□□□□ -0.64
CDH3-210ENST00000569117 AGPAT1Q99943 283 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 LPIN3Q9BQK8 851 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 EMILIN2Q9BXX0 1053 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 B3GNT5Q9BYG0 378 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 ZNF576Q9H609 170 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 KRT82Q9NSB4 513 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 TMLHEQ9NVH6 421 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 HSFX1Q9UBD0 423 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 MYO16Q9Y6X6 1858 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 GREB1Q4ZG55 1949 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 HIDE1A8MVS5 230 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 M0QYV0 167 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 LPXNO60711 386 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 MICAL2O94851 1124 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 ABLIM3O94929 683 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 VNN2O95498 520 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 CXCL14O95715 111 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 C1RP00736 705 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 FAM200BP0CF97 657 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 SETSIPP0DME0 302 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 CDH5P33151 784 aaPredicted RBP11.05□□□□□ -0.64
CDH3-210ENST00000569117 EIF4A3P38919 411 aaKnown RBP11.05□□□□□ -0.64
CDH3-210ENST00000569117 NOMO3P69849 1222 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 CCZ1BP86790 482 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 CCZ1P86791 482 aaPredicted RBP11.05□□□□□ -0.64
CDH3-210ENST00000569117 CYP27A1Q02318 531 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 PTPROQ16827 1216 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 ASTE1Q2TB18 679 aaPredicted RBP11.05□□□□□ -0.64
CDH3-210ENST00000569117 TAF3Q5VWG9 929 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 MAMSTRQ6ZN01 415 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 PAQR9Q6ZVX9 377 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 LAPTM4BQ86VI4 370 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 VPS36Q86VN1 386 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 TTC30AQ86WT1 665 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 TMTC1Q8IUR5 882 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 SPATA2LQ8IUW3 424 aaPredicted RBP11.05□□□□□ -0.64
CDH3-210ENST00000569117 GLYCTKQ8IVS8 523 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 CCDC170Q8IYT3 715 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 ANKRD52Q8NB46 1076 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 MRPL38Q96DV4 380 aaKnown RBP11.05□□□□□ -0.64
CDH3-210ENST00000569117 KLHL5Q96PQ7 755 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 ZNF518BQ9C0D4 1074 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 LHX5Q9H2C1 402 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 NHEJ1Q9H9Q4 299 aaPredicted RBP11.05□□□□□ -0.64
CDH3-210ENST00000569117 HESX1Q9UBX0 185 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 AFF4Q9UHB7 1163 aaKnown RBP11.05□□□□□ -0.64
CDH3-210ENST00000569117 CEP83Q9Y592 693 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 PCDHB5Q9Y5E4 795 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 PCDHGC5Q9Y5F6 944 aa11.05□□□□□ -0.64
CDH3-210ENST00000569117 SOWAHDA6NJG2 315 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 CLDN5O00501 218 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
CDH3-210ENST00000569117 DDX3XO00571 662 aaKnown RBP eCLIP11.04□□□□□ -0.64
CDH3-210ENST00000569117 NRDCO43847 1150 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 CYP1A1P04798 512 aaPredicted RBP11.04□□□□□ -0.64
CDH3-210ENST00000569117 ATF2P15336 505 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 NPR3P17342 541 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 ADORA2BP29275 332 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 CA8P35219 290 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 MAGEA11P43364 429 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 KIF11P52732 1056 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 ARPP19P56211 112 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 BST2Q10589 180 aaKnown RBP11.04□□□□□ -0.64
CDH3-210ENST00000569117 SLC18A3Q16572 532 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 CRTC2Q53ET0 693 aaPredicted RBP11.04□□□□□ -0.64
CDH3-210ENST00000569117 DMRTA1Q5VZB9 504 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 VSTM1Q6UX27 236 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 CLEC20AQ6ZU45 233 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 PALB2Q86YC2 1186 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 PASD1Q8IV76 773 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 SLC30A5Q8TAD4 765 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 ZNF461Q8TAF7 563 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 SECISBP2LQ93073 1101 aaKnown RBP11.04□□□□□ -0.64
CDH3-210ENST00000569117 CCDC42Q96M95 316 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 PGLYRP2Q96PD5 576 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 MED10Q9BTT4 135 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 TTYH1Q9H313 450 aaPredicted RBP11.04□□□□□ -0.64
CDH3-210ENST00000569117 DEF6Q9H4E7 631 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 CSNK1G1Q9HCP0 422 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 PNPLA8Q9NP80 782 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 DMAP1Q9NPF5 467 aaPredicted RBP11.04□□□□□ -0.64
CDH3-210ENST00000569117 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 ABI2Q9NYB9 513 aaPredicted RBP11.04□□□□□ -0.64
CDH3-210ENST00000569117 FBXW11Q9UKB1 542 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 MAFFQ9ULX9 164 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 NENFQ9UMX5 172 aa11.04□□□□□ -0.64
CDH3-210ENST00000569117 A0A087X0T9 212 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
CDH3-210ENST00000569117 ARHGAP6O43182 974 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 CSPG5O95196 566 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 LCA5LO95447 670 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 GLUD1P00367 558 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 FAM228BP0C875 321 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 UNGP13051 313 aaPredicted RBP11.03□□□□□ -0.64
CDH3-210ENST00000569117 TNFAIP3P21580 790 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 BDNFP23560 247 aa11.03□□□□□ -0.64
CDH3-210ENST00000569117 CYLC1P35663 651 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms