RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 RALGPS2Q86X27 583 aaPredicted RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 FBXL13Q8NEE6 735 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 PLEKHO2Q8TD55 490 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 FAXDC2Q96IV6 333 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 IER2Q9BTL4 223 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 NT5C1AQ9BXI3 368 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 NACA2Q9H009 215 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 SEMA4AQ9H3S1 761 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 DPEP3Q9H4B8 488 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 DMAP1Q9NPF5 467 aaPredicted RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 GKN1Q9NS71 199 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 ARMCX3Q9UH62 379 aaPredicted RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 AP1G2O75843 785 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 HOXD11P31277 338 aaPredicted RBP11.01□□□□□ -0.65
UBR1-207ENST00000568782 RAP1GAPP47736 663 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 IFNAR2P48551 515 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 NDST1P52848 882 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 UBE2HP62256 183 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 YWHAEP62258 255 aaKnown RBP11.01□□□□□ -0.65
UBR1-207ENST00000568782 PDGFRLQ15198 375 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 DGKKQ5KSL6 1271 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 ANKRD40Q6AI12 368 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 ISM2Q6H9L7 571 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 KLHL10Q6JEL2 608 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 DDX42Q86XP3 938 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBR1-207ENST00000568782 NKD2Q969F2 451 aaPredicted RBP11.01□□□□□ -0.65
UBR1-207ENST00000568782 FBXO32Q969P5 355 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 B3GNT5Q9BYG0 378 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 NIF3L1Q9GZT8 377 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 GZF1Q9H116 711 aaPredicted RBP11.01□□□□□ -0.65
UBR1-207ENST00000568782 FBXO44Q9H4M3 255 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 LMAN1LQ9HAT1 526 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBR1-207ENST00000568782 FAM86C1Q9NVL1 165 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 COMMD8Q9NX08 183 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 RAB20Q9NX57 234 aa11.01□□□□□ -0.65
UBR1-207ENST00000568782 HELZP42694 1942 aaKnown RBP11.01□□□□□ -0.65
UBR1-207ENST00000568782 SPECC1L-ADORA2AF8WAN1 911 aa11□□□□□ -0.65
UBR1-207ENST00000568782 CLDN5O00501 218 aa11□□□□□ -0.65
UBR1-207ENST00000568782 SLC9A3R1O14745 358 aaPredicted RBP11□□□□□ -0.65
UBR1-207ENST00000568782 PRAMEF12O95522 483 aa11□□□□□ -0.65
UBR1-207ENST00000568782 GNA14O95837 355 aa11□□□□□ -0.65
UBR1-207ENST00000568782 FAM200BP0CF97 657 aa11□□□□□ -0.65
UBR1-207ENST00000568782 CD58P19256 250 aa11□□□□□ -0.65
UBR1-207ENST00000568782 TARSP26639 723 aaKnown RBP11□□□□□ -0.65
UBR1-207ENST00000568782 NRLP54845 237 aa11□□□□□ -0.65
UBR1-207ENST00000568782 PPP3CAQ08209 521 aa11□□□□□ -0.65
UBR1-207ENST00000568782 TAF10Q12962 218 aa11□□□□□ -0.65
UBR1-207ENST00000568782 RUNX3Q13761 415 aa11□□□□□ -0.65
UBR1-207ENST00000568782 ZCWPW2Q504Y3 356 aa11□□□□□ -0.65
UBR1-207ENST00000568782 SPOPLQ6IQ16 392 aa11□□□□□ -0.65
UBR1-207ENST00000568782 POTEHQ6S545 545 aa11□□□□□ -0.65
UBR1-207ENST00000568782 TMEM150AQ86TG1 271 aa11□□□□□ -0.65
UBR1-207ENST00000568782 FAM35AQ86V20 835 aa11□□□□□ -0.65
UBR1-207ENST00000568782 ADSSL1Q8N142 457 aa11□□□□□ -0.65
UBR1-207ENST00000568782 CRYBG2Q8N1P7 616 aa11□□□□□ -0.65
UBR1-207ENST00000568782 CPA6Q8N4T0 437 aa11□□□□□ -0.65
UBR1-207ENST00000568782 ARL14EPQ8N8R7 260 aaPredicted RBP11□□□□□ -0.65
UBR1-207ENST00000568782 CCDC26Q8TAB7 109 aa11□□□□□ -0.65
UBR1-207ENST00000568782 SPATA20Q8TB22 786 aa11□□□□□ -0.65
UBR1-207ENST00000568782 TAS1R2Q8TE23 839 aa11□□□□□ -0.65
UBR1-207ENST00000568782 ATRIPQ8WXE1 791 aa11□□□□□ -0.65
UBR1-207ENST00000568782 OVCA2Q8WZ82 227 aa11□□□□□ -0.65
UBR1-207ENST00000568782 ERCC4Q92889 916 aaPredicted RBP11□□□□□ -0.65
UBR1-207ENST00000568782 USP13Q92995 863 aaPredicted RBP11□□□□□ -0.65
UBR1-207ENST00000568782 ATP2A3Q93084 1043 aa11□□□□□ -0.65
UBR1-207ENST00000568782 CLDN23Q96B33 292 aa11□□□□□ -0.65
UBR1-207ENST00000568782 ZFYVE19Q96K21 471 aa11□□□□□ -0.65
UBR1-207ENST00000568782 CEP63Q96MT8 703 aa11□□□□□ -0.65
UBR1-207ENST00000568782 ZNF518BQ9C0D4 1074 aa11□□□□□ -0.65
UBR1-207ENST00000568782 SMG9Q9H0W8 520 aaKnown RBP11□□□□□ -0.65
UBR1-207ENST00000568782 FAM124BQ9H5Z6 455 aaPredicted RBP11□□□□□ -0.65
UBR1-207ENST00000568782 DUS2Q9NX74 493 aaKnown RBP11□□□□□ -0.65
UBR1-207ENST00000568782 GTSE1Q9NYZ3 720 aa11□□□□□ -0.65
UBR1-207ENST00000568782 FBXO4Q9UKT5 387 aa11□□□□□ -0.65
UBR1-207ENST00000568782 CACNA1IQ9P0X4 2223 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 NRG2O14511 850 aaPredicted RBP10.99□□□□□ -0.65
UBR1-207ENST00000568782 GFRA3O60609 400 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 LRRN2O75325 713 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 ADORA2BP29275 332 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 CTHP32929 405 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 NBL1P41271 181 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 CCR3P51677 355 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 CSTF1Q05048 431 aaKnown RBP10.99□□□□□ -0.65
UBR1-207ENST00000568782 GOLGA8FQ08AF8 430 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 GOLGA8DPQ0D2H9 430 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 GRSF1Q12849 480 aaKnown RBP eCLIP10.99□□□□□ -0.65
UBR1-207ENST00000568782 MTF1Q14872 753 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 CCDC142Q17RM4 750 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 FRMD5Q7Z6J6 570 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 SYNPOQ8N3V7 929 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 TRIML1Q8N9V2 468 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 TTC8Q8TAM2 541 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 SLC2A14Q8TDB8 520 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 NELFBQ8WX92 580 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 RSPRY1Q96DX4 576 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 CYFIP2Q96F07 1278 aa10.99□□□□□ -0.65
UBR1-207ENST00000568782 HEXIM2Q96MH2 286 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms