RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 CD58P19256 250 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CALB2P22676 271 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 GLRA2P23416 452 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CHKAP35790 457 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 GJC1P36383 396 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CDKN2BP42772 138 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PHKA2P46019 1235 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CTCFP49711 727 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ACOT2P49753 483 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 VPS41P49754 854 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 NLRP11P59045 1033 aaKnown RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 MYL6P60660 151 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 MRPS35P82673 323 aaKnown RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF200P98182 395 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CDK16Q00536 496 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 KRT72Q14CN4 511 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 LRRC14Q15048 493 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PCBP1Q15365 356 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 OASLQ15646 514 aaKnown RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CCDC6Q16204 474 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 DNAL1Q4LDG9 190 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 TTC39BQ5VTQ0 682 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 KAZNQ674X7 775 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CDCA2Q69YH5 1023 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 GPAT2Q6NUI2 795 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 METTL7BQ6UX53 244 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 MFSD7Q6UXD7 560 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 C3orf62Q6ZUJ4 267 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 RFX6Q8HWS3 928 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CDKL3Q8IVW4 592 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CCDC60Q8IWA6 550 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ZDHHC14Q8IZN3 488 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 SMC1BQ8NDV3 1235 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 SLC35B2Q8TB61 432 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 DENND1AQ8TEH3 1009 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 BSNDQ8WZ55 320 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CDKL2Q92772 493 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ATG4CQ96DT6 458 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 C9orf72Q96LT7 481 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ADPGKQ9BRR6 497 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 NAT9Q9BTE0 207 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PI4K2AQ9BTU6 479 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 TARS2Q9BW92 718 aaKnown RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 NFKBIZQ9BYH8 718 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 WWP1Q9H0M0 922 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 IKZF4Q9H2S9 585 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 SMARCAD1Q9H4L7 1026 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 MANSC1Q9H8J5 431 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 VRTNQ9H8Y1 702 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CD248Q9HCU0 757 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PNPLA8Q9NP80 782 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 TOPORSQ9NS56 1045 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CISHQ9NSE2 258 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 EURLQ9NYK6 297 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 DONSONQ9NYP3 566 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PPP1R1BQ9UD71 204 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PGAP2Q9UHJ9 254 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 BCAP29Q9UHQ4 241 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 DNPEPQ9ULA0 475 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 SNCAIPQ9Y6H5 919 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ADGRA2Q96PE1 1338 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ADAMTSL1Q8N6G6 1762 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 XPOTO43592 962 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 TLL1O43897 1013 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 HBP1O60381 514 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 LPXNO60711 386 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 DNAJC6O75061 913 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 HAUS5O94927 633 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 STBD1O95210 358 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 VNN1O95497 513 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 SNRPAP09012 282 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 HOXC6P09630 235 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 MCF2P10911 925 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 MYL4P12829 197 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 PTPRAP18433 802 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 KDELR1P24390 212 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 SCNN1AP37088 669 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 NR2C2P49116 596 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ARFIP2P53365 341 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 EIF3EP60228 445 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 PSMC1P62191 440 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 CXCL9Q07325 125 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ILF2Q12905 390 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 NAA25Q14CX7 972 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 TRIP13Q15645 432 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 DALRD3Q5D0E6 543 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF484Q5JVG2 852 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 STXBP5Q5T5C0 1151 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 FAM91A1Q658Y4 838 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF449Q6P9G9 518 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 DARS2Q6PI48 645 aaKnown RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 TSHZ1Q6ZSZ6 1077 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 CYS1Q717R9 158 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 ILDR2Q71H61 639 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 PDZD4Q76G19 769 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-250ENST00000568290 SLC26A11Q86WA9 606 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 RIOX2Q8IUF8 465 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 VPS52Q8N1B4 723 aa7.98□□□□□ -1.13
ATXN3-250ENST00000568290 FAM160A2Q8N612 972 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms